CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017978_P001	Maize	plasma membrane	67.55	94.29
Zm00001d051814_P002	Maize	vacuole	63.46	90.41
Os02t0738600-01	Rice	mitochondrion	61.87	84.81
TraesCS6B01G342600.1	Wheat	vacuole	59.5	84.62
TraesCS6A01G312400.1	Wheat	vacuole	59.37	83.49
TraesCS6D01G291800.1	Wheat	vacuole	59.63	83.09
OQU76161	Sorghum	vacuole	46.57	80.05
EES15002	Sorghum	endoplasmic reticulum, extracellular	46.97	70.36
PGSC0003DMT400001781	Potato	extracellular, vacuole	44.33	66.8
EER98860	Sorghum	golgi, mitochondrion, vacuole	47.76	66.79
Solyc07g049300.2.1	Tomato	extracellular, vacuole	44.2	66.6
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	45.51	66.22
KRH14764	Soybean	cytosol, nucleus, vacuole	34.17	63.79
GSMUA_Achr7P02160_001	Banana	vacuole	42.88	63.73
AT2G32990.1	Thale cress	extracellular, vacuole	43.67	63.05
Bra005536.1-P	Field mustard	vacuole	43.4	63.03
CDY17123	Canola	vacuole	43.4	63.03
CDY19428	Canola	vacuole	43.4	63.03
EES06282	Sorghum	extracellular, vacuole	44.46	62.99
KRH73374	Soybean	vacuole	43.54	62.98
CDY19174	Canola	vacuole	43.4	62.43
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	41.69	61.96
CDY23776	Canola	vacuole	42.88	61.79
Bra021821.1-P	Field mustard	vacuole	41.03	61.1
EES00659	Sorghum	vacuole	32.59	49.3
KXG21209	Sorghum	cytosol	24.8	48.33
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	40.63	47.09
EES13257	Sorghum	extracellular	31.0	46.81
EES19222	Sorghum	vacuole	38.65	46.73
EES07307	Sorghum	vacuole	31.0	46.63
EES04405	Sorghum	plasma membrane, vacuole	31.13	45.91
EES13778	Sorghum	extracellular	30.08	44.1
EES12225	Sorghum	plastid	29.55	43.5
EES05890	Sorghum	vacuole	27.7	42.25
EES13091	Sorghum	vacuole	34.7	41.75
EER89549	Sorghum	mitochondrion	30.34	40.93
OQU89810	Sorghum	extracellular, plastid, vacuole	29.02	39.36
KXG31545	Sorghum	cytosol	25.2	35.11

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:C5XZ77
EnsemblPlants:EES07289	ProteinID:EES07289	ProteinID:EES07289.2	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF52	MetaCyc:PWY-6788
EnsemblPlantsGene:SORBI_3004G244600	SUPFAM:SSF48208	UniParc:UPI0007F2FB43	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:59226047..59230255

Molecular Weight (calculated)

82975.4 Da

IEP (calculated)

9.184

GRAVY (calculated)

-0.541

Length

758 amino acids

Sequence
(BLAST)

001: MHSLRPIQTH TPRSGRPSAG SKSAPPCACL RASPRPNPPQ PIHYLTNQTR TSPVLALQTH ADATAPPERD ARIARLYFSW PRLLLARPPG PSPEPLRCRV
101: FYSILPGGAE PIQHAVRLCR AGSRQPGYKP RARAAGNRGR SGDGARGQAS QSSDHAHTDA RAERGREEDS RQPTAGRQAG GGRGTERPRA GHPPPHMREG
201: AAARRQQPRR AHAKAPRGDS PRAMSSAAAT ATSCHRLGVA LPLLLLLAAA AVLGGAEGKA HSYEDALQKS LLYFEAQRSG RLPHSQRVAW RHHSGLTDGL
301: EQGVDLVGGY YDAGDHVKFG LPMAFTVTML SWSLIEYGGD VADAGELGHA LEAVKWGTDY FIKAHTRPDE LWAEVGDGDT DHYCWQRPED MTTSRQAYKV
401: DRDHPGSDVA GETAAAMAAA SIVFRDSNPH YAHLLLHHAQ QLFEFADKYR GKYDSSIAEV KSYYASVSGY KDELLWAALW LHRATGRADY LDYVVDNADS
501: FGGTGWAINE FSWDVKYAGV QIIAARLLLR GEHATRHRST LERYRAKAER YVCACLGRNT EGGADANVER SPGGMLYIRQ WNNMQYVTSA AFLLSVYSDY
601: LAEAGAPTVS CAGGETVAAE EVFALARAQV DYVLGTNPRG VSYLVGYGSK YPNRVHHRAA SIVPYKHSKE FIGCTQGFDH WFGRRSSNPN VLVGAIVGGP
701: DRQDRFRDNR ENYMQTEACT YNTAPMVGMF AKLHRMARQE REHGSPAPVP VTSTAAEV

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.