CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

plastid 5
vacuole 2
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021280_P004	Maize	vacuole	91.23	92.73
TraesCS5A01G317400.1	Wheat	plastid	78.71	86.27
TraesCS5B01G318000.1	Wheat	vacuole	78.53	85.58
HORVU5Hr1G081200.5	Barley	vacuole	78.53	85.24
TraesCS5D01G323700.2	Wheat	vacuole	81.04	82.36
Os09t0530200-01	Rice	mitochondrion	74.6	80.97
GSMUA_Achr1P07760_001	Banana	vacuole	66.73	74.45
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	58.5	74.32
GSMUA_Achr2P03400_001	Banana	extracellular	66.01	73.95
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	63.33	71.52
KRH60771	Soybean	extracellular, vacuole	61.9	70.47
KRH51463	Soybean	extracellular	62.08	70.24
KRH29353	Soybean	extracellular, vacuole	59.57	66.33
Solyc01g110340.2.1	Tomato	extracellular, vacuole	58.68	66.13
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	58.14	65.66
Bra011881.1-P	Field mustard	cytosol	54.92	64.63
CDY42599	Canola	cytosol	54.56	64.21
AT4G39010.1	Thale cress	extracellular, vacuole	55.81	62.78
CDY41955	Canola	extracellular, vacuole	55.46	62.63
EES00659	Sorghum	vacuole	52.59	58.68
EES07307	Sorghum	vacuole	52.59	58.33
AT4G39000.1	Thale cress	extracellular, vacuole	48.12	54.56
Bra033592.1-P	Field mustard	extracellular	47.76	54.27
CDX72723	Canola	extracellular	47.76	54.27
CDY22399	Canola	extracellular	47.76	54.27
CDY22400	Canola	extracellular, vacuole	45.08	54.19
CDY41954	Canola	vacuole	44.36	53.1
Bra033591.1-P	Field mustard	extracellular, vacuole	46.51	53.06
EES13257	Sorghum	extracellular	47.59	52.99
CDY42597	Canola	extracellular	44.19	52.89
EER89549	Sorghum	mitochondrion	53.13	52.85
Bra011882.1-P	Field mustard	extracellular	46.15	52.44
EES12225	Sorghum	plastid	47.05	51.07
EES04405	Sorghum	plasma membrane, vacuole	46.33	50.39
EES13778	Sorghum	extracellular	40.97	44.29
EES05890	Sorghum	vacuole	37.03	41.65
KXG21209	Sorghum	cytosol	28.8	41.39
EES15002	Sorghum	endoplasmic reticulum, extracellular	37.39	41.3
EER98860	Sorghum	golgi, mitochondrion, vacuole	39.18	40.41
EES06282	Sorghum	extracellular, vacuole	37.57	39.25
OQU76161	Sorghum	vacuole	30.59	38.78
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	42.58	36.39
EES19222	Sorghum	vacuole	40.79	36.36
EES13091	Sorghum	vacuole	40.43	35.87
EES07289	Sorghum	mitochondrion	39.36	29.02
KXG31545	Sorghum	cytosol	23.79	24.45

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1W0W606
GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798
GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	EnsemblPlants:OQU89810	ProteinID:OQU89810
ProteinID:OQU89810.1	PFAM:PF00759	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	MetaCyc:PWY-6788
EnsemblPlantsGene:SORBI_3002G273500	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0009DC835D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:65658218..65661314

Molecular Weight (calculated)

61197.8 Da

IEP (calculated)

6.323

GRAVY (calculated)

-0.328

Length

559 amino acids

Sequence
(BLAST)

001: MAPCSAPRSS PVHHLCVHIL LASLLAARWL VPSCSASSFF RVPWPAGRGR HDYRDALAKS ILFFEGQRSG RLPPGQRASW RGDSGVSDGA AAGVDLEGGY
101: YDAGDNVKFG FPMAFTTTML AWSVIEFGDS MPRDERRHAA AAVRWATDYL LKTLAHPGVI FLQASARHCC CALPVCHVLS CRRSRAAGIA ESAVRRAMQV
201: GDPWKDHDCW ERPEDMDTDR TVYNVSAGRP GSDIAGETAA ALAAASMVFR DADPEYAETL LTSARKAFEF ADTYKGAYSD DPDLRAGGCP FYCDFNGYQD
301: ELLWGAAWLR RASEDDTFLQ YIQNNGKTLG AEDSSNEFGW DNKHAGLNVL VSKEFIEGDA LSLQSYKEFA DSFICTLIPE SSSPHITYTP GGMIYKPGGS
401: NMQHVTSISF LLLTYAKYLS KSSHTVNCGD VSVGPLTLQL QAKKQVDYLL GDNPMKMSYM IGYGDRYPQR IHHRASSLPS IKDHPQQMVC KEGTPYFNSS
501: SANPNPLIGA VVGGPGEDDA YEDDRADFRK SEPTTYINAP LVGVLAYFVG NPNPGHTRH

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.