Factsheet for GSMUA_Achr2P03400_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P07760_001	Banana	vacuole	84.57	84.23
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	70.94	80.45
TraesCS5A01G317400.1	Wheat	plastid	72.55	70.98
KRH60771	Soybean	extracellular, vacuole	69.14	70.26
TraesCS5B01G318000.1	Wheat	vacuole	72.14	70.18
Os09t0530200-01	Rice	mitochondrion	72.34	70.1
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	69.34	69.9
KRH51463	Soybean	extracellular	68.94	69.64
HORVU5Hr1G081200.5	Barley	vacuole	71.74	69.51
KRH29353	Soybean	extracellular, vacuole	67.33	66.93
Zm00001d021280_P004	Maize	vacuole	73.75	66.91
Solyc01g110340.2.1	Tomato	extracellular, vacuole	65.93	66.33
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	65.73	66.26
TraesCS5D01G323700.2	Wheat	vacuole	72.95	66.18
OQU89810	Sorghum	extracellular, plastid, vacuole	73.95	66.01
Bra011881.1-P	Field mustard	cytosol	61.72	64.84
CDY42599	Canola	cytosol	61.52	64.63
CDY41955	Canola	extracellular, vacuole	62.53	63.03
AT4G39010.1	Thale cress	extracellular, vacuole	62.32	62.58
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	57.11	57.11
GSMUA_Achr11P...	Banana	extracellular, vacuole	56.91	56.13
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	49.5	54.65
Bra033592.1-P	Field mustard	extracellular	53.11	53.86
CDY22399	Canola	extracellular	53.11	53.86
CDX72723	Canola	extracellular	52.91	53.66
CDY41954	Canola	vacuole	50.1	53.53
AT4G39000.1	Thale cress	extracellular, vacuole	52.3	52.94
Bra011882.1-P	Field mustard	extracellular	52.1	52.85
CDY22400	Canola	extracellular, vacuole	48.9	52.47
CDY42597	Canola	extracellular	49.1	52.46
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.69	52.01
Bra033591.1-P	Field mustard	extracellular, vacuole	50.7	51.63
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	47.49	51.3
GSMUA_Achr11P...	Banana	vacuole	50.1	50.0
GSMUA_Achr11P...	Banana	cytosol	48.9	49.8
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	38.88	43.21
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	39.68	43.14
GSMUA_Achr2P05330_001	Banana	vacuole	40.28	41.88
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	38.48	40.0
GSMUA_Achr7P02160_001	Banana	vacuole	40.08	39.22
GSMUA_Achr6P22750_001	Banana	vacuole	40.68	39.04
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.28	38.43
GSMUA_Achr2P03770_001	Banana	vacuole	45.29	37.11
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.48	35.38
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	38.48	23.56

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
EnsemblPlantsGene:GSMUA_Achr2G03400_001	EnsemblPlants:GSMUA_Achr2P03400_001	EnsemblPlants:GSMUA_Achr2T03400_001	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M0S4T1	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000296CB22	SEG:seg	:

Description

Endoglucanase 23 [Source:GMGC_GENE;Acc:GSMUA_Achr2G03400_001]

Coordinates

chr2:+:9075391..9078098

Molecular Weight (calculated)

54268.6 Da

IEP (calculated)

4.649

GRAVY (calculated)

-0.221

Length

499 amino acids

Sequence
(BLAST)

001: MTPFFLLQLL ISVSLTLASS HDYHEALSKS ILFFEGQRSG KLPPDQRAGW RGDSALSDGS EAGVDLTGGY YDAGDNVKFG FPMAFTTTML SWSVIEFGEL
101: MPTDELRNAA VAIRWATDYL LKTISHPGLV FVQVGNPISD HNCWERPEDM DTARTVYNVS ADRPGSEVAG ETAAALAAAA FEFADTYKGA YSDDPQLKAG
201: VCPFYCDFDG GGGVGFSLTT CTIVKLHVKG CLRGGQLTQD ELLWGAAWLR RASQNDSFLD YIQNNGKTLG ADDNINEFGW DNKHAGLNVL VSKEFMEGQA
301: LSLESYKEFA DSFMCTLIPE SSSSHIQFTP GGLIYRPGGS NMQHVTSISF LLLTYAKYLS KSSQTANCGS IQVDPSSLQL QAKKQVDYLL GDNPMNMSYM
401: VGYGDRYPQR IHHRGSSLPS VSSHPQFIAC KDGSDYYKSA NPNPNPLVGA VVGGPGEDDV YEDDRADFRK SEPTTYINAP LVGVLAYFVA NPNAGLVLT

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.