Factsheet for GSMUA_Achr3P28200_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
vacuole 3
plasma membrane 3
extracellular 3
endoplasmic reticulum 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05330_001	Banana	vacuole	73.64	70.42
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	67.97	65.0
PGSC0003DMT400001781	Potato	extracellular, vacuole	65.36	59.64
Solyc07g049300.2.1	Tomato	extracellular, vacuole	64.92	59.24
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	66.23	58.35
AT2G32990.1	Thale cress	extracellular, vacuole	66.67	58.29
CDY19428	Canola	vacuole	66.01	58.05
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	67.32	57.87
Bra005536.1-P	Field mustard	vacuole	65.58	57.66
CDY17123	Canola	vacuole	65.58	57.66
CDY19174	Canola	vacuole	65.8	57.31
CDY23776	Canola	vacuole	65.36	57.03
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	65.14	56.84
Bra021821.1-P	Field mustard	vacuole	62.75	56.58
KRH73374	Soybean	vacuole	64.05	56.11
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	64.27	55.77
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	64.27	55.77
GSMUA_Achr7P02160_001	Banana	vacuole	61.66	55.49
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.83	55.39
EES06282	Sorghum	extracellular, vacuole	64.27	55.14
KRH14764	Soybean	cytosol, nucleus, vacuole	48.58	54.93
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	61.0	54.9
HORVU6Hr1G022270.2	Barley	mitochondrion	63.83	53.56
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	44.44	45.43
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	47.06	43.29
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	55.12	43.25
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.18	42.19
GSMUA_Achr2P03770_001	Banana	vacuole	55.77	42.04
GSMUA_Achr11P...	Banana	extracellular, vacuole	46.19	41.9
GSMUA_Achr1P07760_001	Banana	vacuole	45.53	41.72
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	39.87	41.59
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	39.65	40.27
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	40.3	40.04
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	71.02	40.0
GSMUA_Achr2P03400_001	Banana	extracellular	43.14	39.68
GSMUA_Achr6P22750_001	Banana	vacuole	43.57	38.46
GSMUA_Achr11P...	Banana	vacuole	41.83	38.4
GSMUA_Achr11P...	Banana	cytosol	40.74	38.16

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G28200_001	EnsemblPlants:GSMUA_Achr3P28200_001	EnsemblPlants:GSMUA_Achr3T28200_001	InterPro:Glyco_hydro_9	InterPro:IPR012341
UniProt:M0SII6	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF96	SUPFAM:SSF48208	SignalP:SignalP-noTM
UniParc:UPI000295B32B	SEG:seg	:	:	:	:

Description

Endoglucanase 11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28200_001]

Coordinates

chr3:-:27550968..27553277

Molecular Weight (calculated)

50809.5 Da

IEP (calculated)

5.914

GRAVY (calculated)

-0.371

Length

459 amino acids

Sequence
(BLAST)

001: MEKVGDKRSM SRRLVALVLL LLLLPTTSRA ASEYREALAK SLLYFEAQRS GRLPYDHRVS WRGHSGLTDG LEQGVDLVGG YYDAGDNVKF GLPMAFTVTM
101: LSWSVVEYGG DIAAAGELKH ALEAIKWGTD YFIKAHTHPN VLWAQVGDGD TDHSCWQRPE DMTTSRQAHK IDEEHPGSEV AGETAAAMAA ASIAFKETNP
201: HYSHVLLHHA QQLFEFGDKH RGRYDDSIGA ARRYYPSGSG YGDELLWAAL WLHRASGSEE YLNYVLDNAY DLNGATWAIS EFSWDIKYAG VQILASKLLM
301: EGGRDLREEQ VSILEQYRAK AHHYLCSCLS MNDDDSGSNV ARTPAGLLFV RRWNNMQYVA GAAFLLASQV DYVLGSNPRG ISYLVGHGGR HPRRGFDEWY
401: GRGGDNPNVV VGALVGGPDD KDEFSDVRGN YVQTEACTYN TAPMVGVLAK LSAKLEEQQ

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.