Factsheet for Zm00001d015292_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06282	Sorghum	extracellular, vacuole	95.06	93.46
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	83.27	82.02
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.9	78.45
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.71	78.26
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.52	78.07
HORVU6Hr1G022270.2	Barley	mitochondrion	76.24	73.31
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	56.84	65.14
GSMUA_Achr2P05330_001	Banana	vacuole	58.56	64.17
Zm00001d051814_P002	Maize	vacuole	64.26	63.53
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	62.36	62.96
PGSC0003DMT400001781	Potato	extracellular, vacuole	60.08	62.82
Solyc07g049300.2.1	Tomato	extracellular, vacuole	59.7	62.43
Zm00001d017978_P001	Maize	plasma membrane	63.88	61.88
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.46	61.88
AT2G32990.1	Thale cress	extracellular, vacuole	61.03	61.14
CDY19428	Canola	vacuole	60.46	60.92
Zm00001d044744_P001	Maize	extracellular, vacuole	62.74	60.89
CDY17123	Canola	vacuole	60.27	60.73
KRH73374	Soybean	vacuole	60.46	60.69
CDY23776	Canola	vacuole	60.65	60.65
Bra005536.1-P	Field mustard	vacuole	60.08	60.54
KRH14764	Soybean	cytosol, nucleus, vacuole	46.58	60.34
Zm00001d020371_P001	Maize	mitochondrion	61.79	60.3
CDY19174	Canola	vacuole	60.27	60.15
Bra021821.1-P	Field mustard	vacuole	56.84	58.74
Zm00001d035442_P001	Maize	extracellular, vacuole	38.21	48.2
Zm00001d037338_P001	Maize	vacuole	45.06	47.4
Zm00001d009097_P001	Maize	extracellular	44.87	45.38
Zm00001d017949_P001	Maize	extracellular	41.83	45.36
Zm00001d015067_P001	Maize	plasma membrane, vacuole	44.68	44.93
Zm00001d010446_P001	Maize	vacuole	52.28	44.14
Zm00001d008952_P001	Maize	extracellular	53.99	44.03
Zm00001d032271_P001	Maize	extracellular	42.59	43.84
Zm00001d026605_P001	Maize	vacuole	51.33	43.2
Zm00001d035082_P001	Maize	extracellular	41.06	43.11
Zm00001d025475_P001	Maize	extracellular, vacuole	41.63	43.03
Zm00001d021280_P004	Maize	vacuole	40.11	38.36
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	58.56	37.79

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100384439	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
ProteinID:AQK68595.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_9	InterPro:IPR012341	EMBL:KC196763	UniProt:M1RLE8
PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF53	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000220DF69	EnsemblPlantsGene:Zm00001d015292	EnsemblPlants:Zm00001d015292_P001	EnsemblPlants:Zm00001d015292_T001	SEG:seg	:

Description

Endoglucanase 11

Coordinates

chr5:-:82970088..82974239

Molecular Weight (calculated)

57227.8 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.256

Length

526 amino acids

Sequence
(BLAST)

001: MSDVSVRFVA LALAAISLAA AAAAAHDYGD ALRKSLLYFE AQRSGRLPYN QRVRWRGHSG LTDGLEQGVD LVGGYYDAGD HVKFGLPMAF TVTLLSWGVL
101: EYGGGVAGAG ELAHALQAIK WGTDYFVKAH TAPAELWAQV GDGDSDHYCW QRPEDMTTSR RAYKVDAEHP GSEVAAETAA AMAAASAVFR RAGDAHYAHL
201: LLHHAQQLFE FADTHRGRYD ESVDVVKSYY PSSSGYQDEL LWAALWLHRA TGRRDYLRYA LDNAEAFGGT GWAVSEFSWD IKYAGLQVLA SQLLVEAKEE
301: RLRLSAEEVA VVEQLRSNAE YYVCSCMNRN PGGAKHNAGR TPAGLLFIRP WNNLQYVSGA AFLLTVYSDV LASLGQPLRC GSGDDGGEPA AGDAGDVLAF
401: AKSQADYILG TNPMRTSYLV GYGAAYPRRV HHRAASSASY RHDRDFIGCL QGFDSWYSAR QENPHDLVGA VVGGPNGEDV FNDHRGAYMQ TEACTYNTAP
501: MVGVFSRLMQ LEGQSPRPAP APAEDL

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.