Factsheet for Zm00001d009097_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00659	Sorghum	vacuole	90.19	93.61
Os01t0312800-01	Rice	extracellular	83.65	87.17
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	80.19	83.73
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	79.42	83.1
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	80.58	79.51
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	79.81	79.2
GSMUA_Achr11P...	Banana	extracellular, vacuole	70.0	71.94
KRH69273	Soybean	extracellular, vacuole	69.42	71.2
KRH31855	Soybean	nucleus	68.85	70.89
KRH68213	Soybean	nucleus	67.31	70.0
VIT_07s0005g00740.t01	Wine grape	plastid	68.46	69.67
PGSC0003DMT400081314	Potato	extracellular	66.54	69.2
CDY22043	Canola	extracellular, vacuole	67.88	68.15
Solyc09g075360.2.1	Tomato	plastid	66.73	68.04
AT4G02290.1	Thale cress	plastid	67.5	68.02
CDY52780	Canola	extracellular, vacuole	67.69	67.95
Bra036281.1-P	Field mustard	extracellular, vacuole	67.69	67.95
Bra018559.1-P	Field mustard	extracellular, vacuole	66.92	67.7
KRG96467	Soybean	extracellular, vacuole	54.04	67.55
CDX97262	Canola	vacuole	66.73	67.51
AT1G02800.1	Thale cress	extracellular, vacuole	64.62	67.07
CDY32480	Canola	extracellular, vacuole	65.0	66.02
CDY37459	Canola	endoplasmic reticulum, extracellular	64.42	65.69
Bra032584.1-P	Field mustard	extracellular, vacuole	64.81	65.18
CDY01915	Canola	cytosol	43.46	62.26
Zm00001d037338_P001	Maize	vacuole	56.92	59.2
Zm00001d017949_P001	Maize	extracellular	53.85	57.73
Zm00001d035082_P001	Maize	extracellular	53.85	55.89
Zm00001d015067_P001	Maize	plasma membrane, vacuole	56.15	55.83
Zm00001d025475_P001	Maize	extracellular, vacuole	54.62	55.8
Zm00001d021280_P004	Maize	vacuole	57.12	54.0
Zm00001d032271_P001	Maize	extracellular	47.12	47.95
Zm00001d051814_P002	Maize	vacuole	46.35	45.3
Zm00001d015292_P001	Maize	endoplasmic reticulum, extracellular, vacuole	45.38	44.87
Zm00001d017978_P001	Maize	plasma membrane	46.54	44.57
Zm00001d044744_P001	Maize	extracellular, vacuole	45.96	44.1
Zm00001d035442_P001	Maize	extracellular, vacuole	34.81	43.41
Zm00001d020371_P001	Maize	mitochondrion	42.88	41.37
Zm00001d008952_P001	Maize	extracellular	49.62	40.0
Zm00001d010446_P001	Maize	vacuole	46.73	39.0
Zm00001d026605_P001	Maize	vacuole	45.96	38.24

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1D6FHP7
ProteinID:AQK91328.1	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF55
SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00084254A1	EnsemblPlantsGene:Zm00001d009097	EnsemblPlants:Zm00001d009097_P001
EnsemblPlants:Zm00001d009097_T001	SEG:seg	:	:	:	:

Description

Endoglucanase 1

Coordinates

chr8:+:35963918..35965928

Molecular Weight (calculated)

56805.6 Da

IEP (calculated)

8.978

GRAVY (calculated)

-0.129

Length

520 amino acids

Sequence
(BLAST)

001: MARLRCVFVV FVLLSSALRL PGDAIASRGH HGPAAHDYRD ALVKSILFFE GQRSGKLPPS QRVSWRRDSG LSDGHSAKVD LVGGYHDAGD NVKFGFPMAF
101: SMTMLAWSVV EFGGLMKSEL QHARDAVRWG ADYLLKATAH PDTIYVQASG VVAFLFLLLF LIERVMVGDA TKDHACWERP EDMDTPRTVY KVDRGTPGSD
201: VAAETAAALA AASLVFRKSD PAYASRLVAR AKRVFEFADK HRGSYSTGLA ADVCPYYCSY SGYQDELLWG AAWLHRATKS PSYLSYIQTN GQVLGADESD
301: NTFGWDNKHA GARVLISKSF LVQRLGALHE YKGHADGFIC SMVPGTATDQ TQYTRGGLLF RLSDSNMQYV TSSSFLLLTY AKYLAFAKQT VRCGGVAVTP
401: QRLRAIARRQ VDYLLGSNPM GMSYMVGYGA KYPRRIHHRA SSLPSVAAHP ARIGCSQGFT ALYAGGANPN LLVGAVVGGP DMQDRFPDER NDHEHSEPAT
501: YINAPLVGAL AYLAHSYGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.