Factsheet for Bra036281.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22043	Canola	extracellular, vacuole	99.81	99.81
Bra018559.1-P	Field mustard	extracellular, vacuole	90.15	90.86
AT4G02290.1	Thale cress	plastid	90.35	90.7
KRH68213	Soybean	nucleus	76.64	79.4
KRG96467	Soybean	extracellular, vacuole	63.13	78.61
KRH31855	Soybean	nucleus	76.06	78.02
KRH69273	Soybean	extracellular, vacuole	76.06	77.71
VIT_07s0005g00740.t01	Wine grape	plastid	76.45	77.5
Bra032584.1-P	Field mustard	extracellular, vacuole	76.25	76.4
PGSC0003DMT400081314	Potato	extracellular	73.75	76.4
Solyc09g075360.2.1	Tomato	plastid	74.13	75.29
GSMUA_Achr11P...	Banana	extracellular, vacuole	72.78	74.51
Os01t0312800-01	Rice	extracellular	68.53	71.14
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	66.8	69.48
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	66.6	69.42
EES00659	Sorghum	vacuole	66.99	69.26
Zm00001d009097_P001	Maize	extracellular	67.95	67.69
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	66.99	66.22
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	66.8	65.65
Bra016192.1-P	Field mustard	extracellular, vacuole	58.11	60.32
Bra024571.1-P	Field mustard	extracellular	57.34	60.12
Bra003946.1-P	Field mustard	extracellular	56.37	59.84
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	53.86	57.76
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	53.47	57.23
Bra011881.1-P	Field mustard	cytosol	51.35	56.0
Bra007982.1-P	Field mustard	extracellular	52.12	55.79
Bra007983.1-P	Field mustard	extracellular	51.93	55.69
Bra013709.1-P	Field mustard	extracellular	47.88	51.67
Bra033591.1-P	Field mustard	extracellular, vacuole	47.68	50.41
Bra033592.1-P	Field mustard	extracellular	47.88	50.41
Bra019296.1-P	Field mustard	extracellular, vacuole	46.53	50.21
Bra011882.1-P	Field mustard	extracellular	47.68	50.2
Bra019455.1-P	Field mustard	golgi, vacuole	45.17	48.15
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.93	47.96
Bra004846.1-P	Field mustard	nucleus	43.44	47.87
Bra004845.1-P	Field mustard	extracellular	42.86	45.4
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	41.7	45.38
Bra004844.1-P	Field mustard	extracellular, vacuole	42.47	44.99
Bra005536.1-P	Field mustard	vacuole	44.59	44.25
Bra021821.1-P	Field mustard	vacuole	42.47	43.22
Bra027735.1-P	Field mustard	extracellular, vacuole	47.49	39.68
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	47.3	39.45
Bra032270.1-P	Field mustard	extracellular	43.44	36.95
Bra018765.1-P	Field mustard	vacuole	43.44	36.06

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra036281
EnsemblPlants:Bra036281.1	EnsemblPlants:Bra036281.1-P	ncoils:Coil	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M4F5C5	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	UniParc:UPI0002541F99	SEG:seg	:

Description

AT4G02290 (E=2e-270) AtGH9B13 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA09:+:288452..290986

Molecular Weight (calculated)

57348.2 Da

IEP (calculated)

9.167

GRAVY (calculated)

-0.228

Length

518 amino acids

Sequence
(BLAST)

001: MALLFFSSSS FDFRVFIVLS FFIVLCNGSS YSSSSPSSSL LSTHHHRHHI AKHNYKDALT KSILFFEGQR SGKLPHNQRM TWRRDSGLSD GSALHVDLVG
101: GYYDAGDNIK FGFPMAFTTT MLSWSVIEFG GLMKSELPNA KAAIRWATDY LLKATARPDT IYVQVGDANK DHSCWERPED MDTQRSVFKV DKNTPGSDVA
201: AETAAALAAA AIVFKKSDPS YSKILLKRAV RVFAFADKYR GTYSAGLKPE VCPFYCSYSG YQDELLWGAA WLQKATKNVK YLNYIKMNGQ VLGAAEYDNT
301: FGWDNKHAGA RILLTKAFLV QKMKTLSEYK GHADNFICSV IPGAPFSSSQ YTPGGLLFKM SDANMQYVTS TSFLLLTYAK YLTSARTVVH CGGSVYTPGR
401: LRSIAKKQVD YLLGDNPLGM SYMVGYGPKF PRRIHHRGSS LPCVASHPAK IQCHEGFSIL NSQSPNPNIL DGAVVGGPDQ HDRFPDERTD YEQSEPATYI
501: NAPLVGALAY FAHSYGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.