Factsheet for Bra000354.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
nucleus 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83426	Canola	extracellular, plastid, vacuole	99.16	98.54
AT2G44570.1	Thale cress	extracellular	81.3	78.66
Bra004846.1-P	Field mustard	nucleus	75.42	76.38
Bra004845.1-P	Field mustard	extracellular	70.38	68.51
Bra004844.1-P	Field mustard	extracellular, vacuole	70.17	68.3
KRG89135	Soybean	extracellular	60.92	59.79
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	55.46	58.8
PGSC0003DMT400069884	Potato	extracellular, vacuole	59.03	58.66
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	59.45	58.59
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	58.82	58.33
Solyc05g052530.1.1	Tomato	extracellular	57.14	55.97
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	55.67	54.08
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	52.52	53.88
TraesCS1A01G072100.1	Wheat	nucleus	55.46	53.88
TraesCS1D01G075100.1	Wheat	vacuole	55.46	53.88
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	55.04	53.47
TraesCS1A01G072300.1	Wheat	vacuole	55.46	53.44
HORVU1Hr1G015550.1	Barley	vacuole	53.78	52.24
TraesCS1D01G074800.1	Wheat	vacuole	50.42	51.72
KXG21209	Sorghum	cytosol	40.34	49.36
Zm00001d035442_P001	Maize	extracellular, vacuole	42.44	48.44
Bra019296.1-P	Field mustard	extracellular, vacuole	48.74	48.33
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	51.05	47.46
Bra013709.1-P	Field mustard	extracellular	47.06	46.67
Bra011881.1-P	Field mustard	cytosol	45.59	45.68
Bra007982.1-P	Field mustard	extracellular	46.43	45.66
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	45.8	45.13
Bra007983.1-P	Field mustard	extracellular	44.96	44.31
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	44.96	44.21
Bra005536.1-P	Field mustard	vacuole	48.32	44.06
Bra032584.1-P	Field mustard	extracellular, vacuole	47.48	43.71
Bra011882.1-P	Field mustard	extracellular	45.17	43.7
Bra021821.1-P	Field mustard	vacuole	46.64	43.61
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.34	43.44
Bra033592.1-P	Field mustard	extracellular	44.75	43.29
Bra003946.1-P	Field mustard	extracellular	44.33	43.24
Bra019455.1-P	Field mustard	golgi, vacuole	43.7	42.8
Bra018559.1-P	Field mustard	extracellular, vacuole	45.59	42.22
Bra024571.1-P	Field mustard	extracellular	43.7	42.11
Bra016192.1-P	Field mustard	extracellular, vacuole	44.12	42.08
Bra033591.1-P	Field mustard	extracellular, vacuole	43.28	42.04
Bra036281.1-P	Field mustard	extracellular, vacuole	45.38	41.7
Bra032270.1-P	Field mustard	extracellular	50.0	39.08
Bra018765.1-P	Field mustard	vacuole	50.63	38.62
Bra027735.1-P	Field mustard	extracellular, vacuole	49.37	37.9
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.37	37.84

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra000354
EnsemblPlants:Bra000354.1	EnsemblPlants:Bra000354.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
UniProt:M4C826	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208
SignalP:SignalP-noTM	UniParc:UPI000253FDCA	SEG:seg	:	:	:

Description

AT2G44570 (E=4e-216) AtGH9B12 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA03:-:10706779..10708642

Molecular Weight (calculated)

51976.9 Da

IEP (calculated)

6.155

GRAVY (calculated)

-0.284

Length

476 amino acids

Sequence
(BLAST)

001: MCIVLLLLST SGKVSAGLNY GEALTKSLLY FEAQRSGKLP SDQRVQWRGD SAPGDGSDVH IDLSGGYYDA GDNMKFGFPL AFTTTMLAWG SVEMASQFQA
101: HNEHQNVLMA LKWATDYLIK AHPEPNVLYG QVGDGKLDHA CWMRPEDMNT SHPRPSYRID AQHPGADLAA ETAAAMAAAS LAFAPSDAAY ANTLISHAKD
201: LFEFGKNHPG VYHDSITNAA GFYSSSGHED ELLWAAAWLH RATGDQMYLD YLTQASNSGG VRSAFSWDDK FVGAQVLAAK VGKVKNEGKM AEYKSMAEHF
301: ICNCAQKGYS NVKKTPGGLL WFLPWENLQY TATASFVLSS YSKYLEAAQA SVQCPNGVLQ AFDLLSLARA QVDYILGSNP KSMSYMVGFG TNYPNRPHHR
401: GSSIVSIKKD SKLKACNEGW YPWYNTHEPN PNVLVGAIVG GPDVNDVYQD ERSDYQHNEP DTVTVAPFVG VFAALA

Best Arabidopsis Sequence Match ( AT2G44570.1 )
(BLAST)

001: MSCISSQCFI TIKSICIVLL LSITCGAVSA NSNYGEALTK SLLYFEAQRS GKLPLDQRVI WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSSVEMES QLKAHQEHGN TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL AGETAAAMAA ASLAFAPSDS
201: AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301: NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS
401: YMVGYGTNYP KRPHHRGASI VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT VAPLLGVLAA IA

Arabidopsis Description

AtGH9B12Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.