Factsheet for TraesCS1D01G074800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	92.46	87.55
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	92.46	87.55
TraesCS1D01G075100.1	Wheat	vacuole	91.38	86.53
HORVU1Hr1G015550.1	Barley	vacuole	89.01	84.29
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	83.19	83.19
KXG21209	Sorghum	cytosol	49.57	59.13
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	64.22	58.2
Zm00001d035442_P001	Maize	extracellular, vacuole	50.86	56.59
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	52.59	54.34
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	54.09	51.97
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	53.66	51.88
PGSC0003DMT400069884	Potato	extracellular, vacuole	52.8	51.15
Bra004846.1-P	Field mustard	nucleus	51.72	51.06
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	53.88	51.02
AT2G44540.1	Thale cress	vacuole	53.66	50.71
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	51.72	50.42
CDX83426	Canola	extracellular, plastid, vacuole	51.72	50.1
AT2G44570.1	Thale cress	extracellular	53.02	50.0
AT2G44560.1	Thale cress	extracellular, vacuole	52.59	49.69
Solyc05g052530.1.1	Tomato	extracellular	51.72	49.38
CDX74668	Canola	extracellular	52.16	49.09
CDX74666	Canola	vacuole	51.29	48.67
KRG89135	Soybean	extracellular	50.86	48.66
CDY47674	Canola	extracellular, vacuole	51.51	48.48
Bra004845.1-P	Field mustard	extracellular	50.86	48.26
CDY47675	Canola	vacuole	50.43	47.85
CDX74667	Canola	extracellular, vacuole	44.61	47.81
CDX74664	Canola	extracellular, vacuole	50.0	47.44
CDX95605	Canola	extracellular, vacuole	50.86	47.29
Bra004844.1-P	Field mustard	extracellular, vacuole	49.14	46.63
TraesCS7D01G314400.1	Wheat	vacuole	48.06	45.14
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.84	44.49
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	46.55	43.37
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.98	42.33
TraesCS1D01G090100.1	Wheat	extracellular	45.04	41.55
TraesCS5D01G208900.1	Wheat	vacuole	47.63	41.23
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.98	41.21
TraesCS7D01G207600.1	Wheat	extracellular	43.97	40.88
TraesCS6D01G291800.1	Wheat	vacuole	47.63	40.62
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	46.55	40.6
TraesCS6D01G089200.1	Wheat	golgi	37.72	40.51
TraesCS6D01G275900.1	Wheat	extracellular	43.1	40.16
TraesCS2D01G308500.1	Wheat	golgi	43.1	40.16
TraesCS5D01G323700.2	Wheat	vacuole	45.47	38.36
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	49.57	37.1
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.66	36.22
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	50.0	35.53
TraesCS2D01G557500.1	Wheat	extracellular	46.55	35.01

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	PFAM:PF00759	PFscan:PS51257	PANTHER:PTHR22298	PANTHER:PTHR22298:SF12
SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G074800	EnsemblPlants:TraesCS1D01G074800.1	SEG:seg

Description

No Description!

Coordinates

chr1D:-:56528823..56530824

Molecular Weight (calculated)

50603.0 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.267

Length

464 amino acids

Sequence
(BLAST)

001: MVARARVLLV AAVVWFLATT ACQAAQRDYA TALTKSLLYF EAQRSGRLPP TQRVQWLGNS ALKDGADHGV DLTGGYYDSG DNVKFGFPMA FTVTMLSWSV
101: VEHRARLAAA GELGHALQAV RWGADYLVKA HARPDVLYVN VGDGNSDHAC WERPEDMDTP RRSYMVNATH TGSDVAAETA AALAAASVAF TGPRGDPRYA
201: STLLKHAKQL FQFARNHRGL YHNSIPSTRG FYSSSSDEQI LKLVWNRTSC CGRQSLSWDD KFVGAQALVA KLILQGKLPN NGRHAEMRSN VESFLCNVVQ
301: HGDGRSGRLP PGGMLYLQPW SNLQDVTTAM FVLVTHADHL AAARASLQCG GVRLPPAQLV SFARSQVDYI LGKNPMKMSY MVGPHHRGAS LPSIRNNPRK
401: ISCGKGSEYF HRSAPNLNVI DGAIVGGPDN NDHYDDSRGN YQQGEPSTYT VAPIVGVLAR LLHN

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.