Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G389300.1 | Wheat | extracellular, vacuole | 97.9 | 97.75 |
| TraesCS4B01G104500.1 | Wheat | extracellular, vacuole | 97.42 | 97.42 |
| HORVU1Hr1G085830.2 | Barley | vacuole | 94.19 | 93.59 |
| EES19222 | Sorghum | vacuole | 85.32 | 84.37 |
| Os05t0212300-01 | Rice | extracellular, vacuole | 85.0 | 83.78 |
| Zm00001d010446_P001 | Maize | vacuole | 83.71 | 83.31 |
| GSMUA_Achr4P08520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 60.32 | 63.93 |
| TraesCS3D01G153400.1 | Wheat | extracellular, mitochondrion, plastid, vacuole | 65.97 | 62.63 |
| PGSC0003DMT400032028 | Potato | endoplasmic reticulum, extracellular, vacuole | 62.26 | 61.76 |
| KRH60035 | Soybean | nucleus | 62.1 | 61.7 |
| VIT_02s0025g01380.t01 | Wine grape | extracellular, vacuole | 62.58 | 61.69 |
| KRH41305 | Soybean | nucleus | 62.1 | 61.6 |
| PGSC0003DMT400012809 | Potato | extracellular, vacuole | 53.55 | 61.48 |
| Solyc08g082250.2.1 | Tomato | extracellular | 61.94 | 61.44 |
| CDY47849 | Canola | extracellular, vacuole | 60.48 | 60.48 |
| CDY34422 | Canola | endoplasmic reticulum, extracellular, vacuole | 60.32 | 60.32 |
| Bra027699.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 60.16 | 60.06 |
| CDY46529 | Canola | extracellular, vacuole | 60.16 | 60.06 |
| Bra027735.1-P | Field mustard | extracellular, vacuole | 60.0 | 60.0 |
| CDX90780 | Canola | endoplasmic reticulum, extracellular | 59.19 | 58.63 |
| CDY05130 | Canola | extracellular, vacuole | 59.03 | 58.47 |
| AT4G11050.1 | Thale cress | vacuole | 58.71 | 58.15 |
| TraesCS7D01G201000.1 | Wheat | extracellular, vacuole | 47.74 | 55.64 |
| TraesCS7D01G146000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.48 | 54.76 |
| Solyc12g055970.1.1 | Tomato | cytosol, nucleus | 40.65 | 54.55 |
| TraesCS6D01G291800.1 | Wheat | vacuole | 47.74 | 54.41 |
| TraesCS6D01G112100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.29 | 54.25 |
| CDY08373 | Canola | cytosol, extracellular, mitochondrion, nucleus | 36.13 | 53.08 |
| TraesCS5D01G208900.1 | Wheat | vacuole | 45.65 | 52.8 |
| TraesCS1D01G074700.1 | Wheat | extracellular, vacuole | 40.97 | 51.84 |
| TraesCS1D01G075100.1 | Wheat | vacuole | 40.65 | 51.43 |
| TraesCS1D01G074900.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 38.39 | 51.29 |
| TraesCS1D01G074800.1 | Wheat | vacuole | 37.1 | 49.57 |
| TraesCS1D01G365100.1 | Wheat | extracellular, vacuole | 39.03 | 48.59 |
| TraesCS5D01G176800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 38.39 | 47.7 |
| TraesCS2D01G557500.1 | Wheat | extracellular | 47.42 | 47.65 |
| TraesCS7D01G207600.1 | Wheat | extracellular | 38.06 | 47.29 |
| TraesCS6D01G275900.1 | Wheat | extracellular | 37.9 | 47.19 |
| TraesCS7D01G314400.1 | Wheat | vacuole | 37.58 | 47.17 |
| TraesCS6D01G089200.1 | Wheat | golgi | 32.1 | 46.06 |
| TraesCS2D01G308500.1 | Wheat | golgi | 35.81 | 44.58 |
| TraesCS1D01G090100.1 | Wheat | extracellular | 35.0 | 43.14 |
| TraesCS5D01G323700.2 | Wheat | vacuole | 37.9 | 42.73 |
| TraesCS6D01G318100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.87 | 41.34 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | InterPro:CBM_49 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 |
| PFAM:PF00759 | PFAM:PF09478 | ScanProsite:PS00592 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF46 | SUPFAM:SSF48208 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G397400 | EnsemblPlants:TraesCS1D01G397400.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:465098246..465101218
Molecular Weight (calculated)
68434.6 Da
IEP (calculated)
8.859
GRAVY (calculated)
-0.336
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MARNSSGAHV AAAIFGLLAL ASMAKLASGH DYAMALKKSL LYFEAQRSGA LPPDQRVTWR ASSGLFDGKA NGVDLVGGYY DAGDNVKFGL PMAFTVTMMS
101: WSILEYGKQM AASGELKNAM DAVKWGTDYF IKAHPEPDVL YGEVGDGDTD HTCWQRPEDM TTSRQAFRVD PQNPGSDLAG ETAAAMAAAS MIFRTTYPGY
201: ANLLLEHSKQ LFEFADKYRG KYDASITVAR NYYGSFSGYG DELLWAAAWL FEATEERFYL EYLARNGDAL GGTGWSINQF GWDVKYPGVQ VLAAKFLLQG
301: RAGEHAEALQ RYRQNAEFFV CSCVGKGAAN VPRTPGGVMY HQRWNNLQFV TSASFLLTVY ADYATVTGRG AVRCPGGAAQ PFEILAFVKS QVNYILGDNP
401: RATSYMVGYG QNYPRQVHHR GASIVSVRTD PSFVSCQEGY ASWYNKQAVN PNVLDGAIVG GPDEYDDFAD ERNNYEQTEA ATYNSAPLLG VLARLAGACG
501: GLDEYQSLPQ VAAANRTSQP AHRRHPHLGI EQNVTRTWAV RRRTYHRYSV TVTNRSRKTV RGLHLGISEL DGRLWGLDKA RYGYVPRRWL RALRPGRSVR
601: FGYVQPGPPA NVWVTGYKLV
101: WSILEYGKQM AASGELKNAM DAVKWGTDYF IKAHPEPDVL YGEVGDGDTD HTCWQRPEDM TTSRQAFRVD PQNPGSDLAG ETAAAMAAAS MIFRTTYPGY
201: ANLLLEHSKQ LFEFADKYRG KYDASITVAR NYYGSFSGYG DELLWAAAWL FEATEERFYL EYLARNGDAL GGTGWSINQF GWDVKYPGVQ VLAAKFLLQG
301: RAGEHAEALQ RYRQNAEFFV CSCVGKGAAN VPRTPGGVMY HQRWNNLQFV TSASFLLTVY ADYATVTGRG AVRCPGGAAQ PFEILAFVKS QVNYILGDNP
401: RATSYMVGYG QNYPRQVHHR GASIVSVRTD PSFVSCQEGY ASWYNKQAVN PNVLDGAIVG GPDEYDDFAD ERNNYEQTEA ATYNSAPLLG VLARLAGACG
501: GLDEYQSLPQ VAAANRTSQP AHRRHPHLGI EQNVTRTWAV RRRTYHRYSV TVTNRSRKTV RGLHLGISEL DGRLWGLDKA RYGYVPRRWL RALRPGRSVR
601: FGYVQPGPPA NVWVTGYKLV
001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
Arabidopsis Description
AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.