Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23560.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT4G23560.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT4G23560.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G107700.1 Wheat extracellular 97.42 96.84
TraesCS1A01G088700.1 Wheat extracellular 96.42 95.85
HORVU1Hr1G019520.1 Barley golgi, mitochondrion, vacuole 93.44 88.18
Os08t0387400-01 Rice extracellular 80.72 78.68
Zm00001d032271_P001 Maize extracellular 75.75 74.56
EES13778 Sorghum extracellular 76.54 74.47
AT4G23560.1 Thale cress extracellular 56.46 59.29
CDY44116 Canola extracellular 56.46 59.17
CDX94202 Canola vacuole 56.46 59.17
Bra013709.1-P Field mustard extracellular 56.46 59.17
CDY10945 Canola extracellular, vacuole 56.26 58.96
Bra019296.1-P Field mustard extracellular, vacuole 56.26 58.96
VIT_02s0025g00430.t01 Wine grape extracellular, vacuole 58.85 58.85
CDY10895 Canola extracellular 56.06 58.75
AT4G09740.1 Thale cress extracellular 55.27 58.16
KRH27886 Soybean extracellular 57.65 56.75
Solyc08g081620.2.1 Tomato extracellular 56.06 56.29
PGSC0003DMT400031762 Potato extracellular 55.86 55.98
TraesCS1D01G365100.1 Wheat extracellular, vacuole 48.11 48.59
TraesCS5D01G176800.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.32 47.7
TraesCS7D01G314400.1 Wheat vacuole 46.12 46.96
TraesCS1D01G074700.1 Wheat extracellular, vacuole 44.93 46.12
TraesCS7D01G207600.1 Wheat extracellular 45.73 46.09
TraesCS1D01G075100.1 Wheat vacuole 44.53 45.71
TraesCS6D01G089200.1 Wheat golgi 38.97 45.37
TraesCS1D01G074900.1 Wheat cytosol, mitochondrion, plastid, vacuole 41.75 45.26
TraesCS6D01G275900.1 Wheat extracellular 44.73 45.18
TraesCS1D01G074800.1 Wheat vacuole 41.55 45.04
TraesCS2D01G308500.1 Wheat golgi 44.14 44.58
TraesCS7D01G146000.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.14 43.11
TraesCS6D01G318100.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.14 42.72
TraesCS7D01G201000.1 Wheat extracellular, vacuole 44.73 42.29
TraesCS5D01G323700.2 Wheat vacuole 45.92 42.0
TraesCS6D01G291800.1 Wheat vacuole 44.53 41.18
TraesCS6D01G112100.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.14 41.02
TraesCS5D01G208900.1 Wheat vacuole 42.54 39.93
TraesCS3D01G153400.1 Wheat extracellular, mitochondrion, plastid, vacuole 46.12 35.53
TraesCS2D01G557500.1 Wheat extracellular 43.54 35.49
TraesCS1D01G397400.1 Wheat extracellular, vacuole 43.14 35.0
Protein Annotations
EnsemblPlants:TraesCS1D01G090100.1EnsemblPlantsGene:TraesCS1D01G090100Gene3D:1.50.10.10GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sf
InterPro:Glyco_hydro_9InterPro:IPR012341KEGG:00500+3.2.1.4PANTHER:PTHR22298PANTHER:PTHR22298:SF22PFAM:PF00759
SEG:segSignalP:SignalP-noTMSUPFAM:SSF48208MapMan:35.1::
Description
No Description!
Coordinates
chr1D:-:76455774..76459142
Molecular Weight (calculated)
54040.4 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.197
Length
503 amino acids
Sequence
(BLAST)
001: MAVKALVVAM MLVVHCFDVG LGAGGDGLCL GSPDYGDALA KAILFFEGQR SGRLPANQRA RWRGNSALAD GRPENVNLTG GYYDAGDNVK FGFPMAFTVT
101: LLSWSAIEYR GDVAAAGQLG NLRAAIHWGA DFLLRAHTSP TTLYTQVGDG NADHGCWERP EDMDTPRTLY KITGDSPGSE AAGEAAAALA AAYLVLKEDG
201: DKAFASRLLA ASKSLFELAN NYRGSFQSSC PFYCSYSGFQ DELLWASAWL YRATKDGKYL NFLRDNQGSS NPVNEFSWDN KQVGAQMLAT QEYLKGRREL
301: ARYKTNLDSF VCALMPDSGN TQIRTTRGAL LFTRDSVNMQ YTTTAALVLS IYSKTLQSWG VSDGVRCSAA SFSPDQIASF AASQVDYILG SNPMGMSYMV
401: GFGGAFPRRI HHRAASIPSI KVLSRRVPCN EGFSSWLPTS DPNPNVHVGA IVGGPDENDQ FGDNRGDSAH SEPATYINAA FVGACAAAMG QSQKPASPTL
501: ASY
Best Arabidopsis Sequence Match ( AT4G23560.1 )
(BLAST)
001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG
Arabidopsis Description
AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.