Factsheet for Bra013709.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010432.1-P
Bra026415.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23560.1	Bra010432.1-P	AT4G26630.1	25387881
AT4G23560.1	Bra026415.1-P	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44116	Canola	extracellular	100.0	100.0
Bra019296.1-P	Field mustard	extracellular, vacuole	86.25	86.25
AT4G23560.1	Thale cress	extracellular	86.04	86.22
AT4G09740.1	Thale cress	extracellular	83.75	84.1
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	71.04	67.79
KRH27886	Soybean	extracellular	70.21	65.95
PGSC0003DMT400031762	Potato	extracellular	68.12	65.14
Solyc08g081620.2.1	Tomato	extracellular	67.29	64.47
TraesCS1D01G090100.1	Wheat	extracellular	59.17	56.46
TraesCS1B01G107700.1	Wheat	extracellular	58.96	55.93
TraesCS1A01G088700.1	Wheat	extracellular	58.54	55.53
EES13778	Sorghum	extracellular	59.79	55.51
Os08t0387400-01	Rice	extracellular	59.38	55.23
Zm00001d032271_P001	Maize	extracellular	58.75	55.19
HORVU1Hr1G019520.1	Barley	golgi, mitochondrion, vacuole	58.96	53.1
Bra032584.1-P	Field mustard	extracellular, vacuole	52.92	49.13
Bra011881.1-P	Field mustard	cytosol	48.33	48.84
Bra018559.1-P	Field mustard	extracellular, vacuole	51.46	48.05
Bra036281.1-P	Field mustard	extracellular, vacuole	51.67	47.88
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	48.12	47.73
Bra004846.1-P	Field mustard	nucleus	46.67	47.66
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	46.67	47.06
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	47.29	47.0
Bra007982.1-P	Field mustard	extracellular	47.29	46.9
Bra004845.1-P	Field mustard	extracellular	47.71	46.83
Bra007983.1-P	Field mustard	extracellular	46.67	46.38
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.5	46.15
Bra024571.1-P	Field mustard	extracellular	47.08	45.75
Bra003946.1-P	Field mustard	extracellular	46.46	45.7
Bra004844.1-P	Field mustard	extracellular, vacuole	46.46	45.6
Bra016192.1-P	Field mustard	extracellular, vacuole	46.67	44.89
Bra019455.1-P	Field mustard	golgi, vacuole	45.42	44.86
Bra033592.1-P	Field mustard	extracellular	44.58	43.5
Bra011882.1-P	Field mustard	extracellular	44.58	43.5
Bra005536.1-P	Field mustard	vacuole	46.88	43.1
Bra033591.1-P	Field mustard	extracellular, vacuole	42.92	42.04
Bra021821.1-P	Field mustard	vacuole	44.38	41.85
Bra027735.1-P	Field mustard	extracellular, vacuole	48.54	37.58
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.54	37.52
Bra032270.1-P	Field mustard	extracellular	47.29	37.27
Bra018765.1-P	Field mustard	vacuole	47.71	36.7

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra013709
EnsemblPlants:Bra013709.1	EnsemblPlants:Bra013709.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M4DB49	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF22	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0002545CF4	SEG:seg	:

Description

AT4G23560 (E=2e-239) AtGH9B15 | AtGH9B15 (Arabidopsis thaliana glycosyl hydrolase 9B15); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA01:-:7309388..7311869

Molecular Weight (calculated)

52841.6 Da

IEP (calculated)

5.240

GRAVY (calculated)

-0.296

Length

480 amino acids

Sequence
(BLAST)

001: MGKLLVIMLV CIFMAFQSLE ALDYGDALNK SILFFEGQRS GKLPVNQRVT WRADSALSDG KPDNVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSLNQLSY LRSSIKWATD FIILAHASPT TLYTQVGDGN SDHSCWERPE DMDTARTLYK INSSSPGSEA AGEAAAALSS AALVFKTVDS NYSSKLLSHA
201: KSLFEFADQY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGENKYISY VISNQDWSQA VNEFSWDNKF AGAQALLASE FYKGKNDLGK FKNDVESFVC
301: ALMPGSSSQQ IEPTPGGLLF TRDSSNLQYV TTAITVLFHY SKTITQARIG SIQCGSTQFT VSQIQNFAKS QVDYILGNNP MKMSYMVGYG NKYPTQPHHR
401: GSSLPSIKSK PEKIDCNGGY SYYNSDQPNP NVHTGAIVGG PDSSDQFSDE RSDYSHAEPT TYINAAFIGP VAALIGLNSN

Best Arabidopsis Sequence Match ( AT4G23560.1 )
(BLAST)

001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG

Arabidopsis Description

AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.