Factsheet for Bra032270.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60076	Canola	extracellular	39.41	99.17
CDY60075	Canola	vacuole	99.84	97.12
CDY65179	Canola	extracellular	99.51	96.81
Bra018765.1-P	Field mustard	vacuole	91.63	89.42
AT1G48930.1	Thale cress	vacuole	90.48	87.88
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	68.47	67.8
PGSC0003DMT400051238	Potato	extracellular	67.98	65.51
KRH24186	Soybean	extracellular, vacuole	67.65	65.5
Solyc02g014220.2.1	Tomato	extracellular	67.32	64.87
KRH29156	Soybean	extracellular, vacuole	66.34	64.43
GSMUA_Achr2P03770_001	Banana	vacuole	57.8	57.8
EES13091	Sorghum	vacuole	57.47	55.56
Zm00001d026605_P001	Maize	vacuole	56.49	55.04
Os04t0674800-01	Rice	extracellular	56.16	54.72
TraesCS2D01G557500.1	Wheat	extracellular	54.68	53.97
HORVU2Hr1G120100.1	Barley	extracellular	54.35	53.73
TraesCS2B01G586600.1	Wheat	extracellular	53.53	53.09
Bra005536.1-P	Field mustard	vacuole	44.99	52.49
Bra004846.1-P	Field mustard	nucleus	39.74	51.49
TraesCS2A01G556300.1	Wheat	vacuole	54.52	51.47
Bra004845.1-P	Field mustard	extracellular	40.89	50.92
Bra021821.1-P	Field mustard	vacuole	42.36	50.69
Bra004844.1-P	Field mustard	extracellular, vacuole	40.39	50.31
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	39.08	50.0
Bra027735.1-P	Field mustard	extracellular, vacuole	49.75	48.87
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.75	48.79
Bra019296.1-P	Field mustard	extracellular, vacuole	38.1	48.33
Bra013709.1-P	Field mustard	extracellular	37.27	47.29
Bra033592.1-P	Field mustard	extracellular	37.27	46.14
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	35.8	45.04
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	35.47	44.72
Bra011882.1-P	Field mustard	extracellular	36.12	44.72
Bra024571.1-P	Field mustard	extracellular	35.96	44.33
Bra007983.1-P	Field mustard	extracellular	35.14	44.31
Bra007982.1-P	Field mustard	extracellular	35.14	44.21
Bra011881.1-P	Field mustard	cytosol	34.48	44.21
Bra003946.1-P	Field mustard	extracellular	35.14	43.85
Bra016192.1-P	Field mustard	extracellular, vacuole	35.8	43.69
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.53	43.44
Bra036281.1-P	Field mustard	extracellular, vacuole	36.95	43.44
Bra018559.1-P	Field mustard	extracellular, vacuole	36.45	43.19
Bra032584.1-P	Field mustard	extracellular, vacuole	36.45	42.94
Bra033591.1-P	Field mustard	extracellular, vacuole	34.32	42.65
Bra019455.1-P	Field mustard	golgi, vacuole	33.66	42.18

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra032270
EnsemblPlants:Bra032270.1	EnsemblPlants:Bra032270.1-P	InterPro:CBM_49	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	UniProt:M4ETY8	PFAM:PF00759	PFAM:PF09478
ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002547C9E	SEG:seg	:	:	:

Description

AT1G48930 (E=1e-257) AtGH9C1 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA05:+:12131530..12134592

Molecular Weight (calculated)

67330.5 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.315

Length

609 amino acids

Sequence
(BLAST)

001: MSRFGGSLFG LSLLLTVLLG AATAAAEYYN YGNALDKTFL FFEAQRSGKL PAAQRVKWRS HSGLADGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNQKELS GSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGKSDH YCWERAEDMT TSRTAYKLDQ YHPGSDLAGE TAAALAAASL AFKPYNSSYS
201: AILLTHAKEL FSFADKYRGL YTDSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDEYYLKY AVNNAGYMGG TGWGMKEFSW DNKYAGVQVL LSKILLEGKG
301: GAYTSTLKQY QMKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAFLLAIYS DYLSAANAKL NCPDGSVPPQ ALLDFSRSQA DYILGKNRQG
401: MSYLVGYGPK YPIRVHHRGA SIPSIFVQRS SVNCVQGFDS WYRRAQADPN VIYGALVGGP DQNDYYSDDR TNYEQSEPTL SGTAPLIGLF AKLSGKLASA
501: YKAAPTIYTP KQSGAPIEFL HSITANWMTW NTRYYRHKVI IKNNSQKPIS GLKLKIEDLT GPIWGLNPTG QKNTYQLPQW QKTLKAGQAY DFVYVQGGPQ
601: AKVSVLSYY

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.