Factsheet for Bra003946.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68334	Canola	endoplasmic reticulum	99.39	99.39
CDY23486	Canola	extracellular	98.98	98.98
Bra016192.1-P	Field mustard	extracellular, vacuole	96.31	94.19
AT1G70710.1	Thale cress	vacuole	93.65	92.89
Bra024571.1-P	Field mustard	extracellular	84.02	83.0
KRH60381	Soybean	nucleus	80.53	79.88
KRH41678	Soybean	nucleus	80.12	79.63
PGSC0003DMT400023082	Potato	extracellular, vacuole	77.87	77.71
Solyc09g010210.2.1	Tomato	plastid	77.66	77.51
HORVU6Hr1G073570.3	Barley	extracellular	74.39	73.04
TraesCS6A01G295300.1	Wheat	extracellular	74.18	72.98
TraesCS6B01G325400.1	Wheat	extracellular	74.18	72.98
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	74.39	72.75
TraesCS6D01G275900.1	Wheat	extracellular	73.77	72.29
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	73.16	71.83
TraesCS7D01G207600.1	Wheat	extracellular	73.16	71.54
HORVU7Hr1G041610.1	Barley	vacuole	73.57	71.51
Os02t0733300-01	Rice	extracellular	74.18	71.26
Zm00001d037338_P001	Maize	vacuole	72.95	71.2
EES07307	Sorghum	vacuole	73.16	70.83
TraesCS7A01G204500.1	Wheat	extracellular	72.95	70.78
Zm00001d017949_P001	Maize	extracellular	69.26	69.69
TraesCS7B01G111700.1	Wheat	extracellular	73.16	67.61
EER89549	Sorghum	mitochondrion	73.57	63.88
Bra011881.1-P	Field mustard	cytosol	56.35	57.89
Bra018559.1-P	Field mustard	extracellular, vacuole	60.45	57.39
Bra036281.1-P	Field mustard	extracellular, vacuole	59.84	56.37
Bra032584.1-P	Field mustard	extracellular, vacuole	59.02	55.71
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	54.3	54.87
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	53.48	53.93
Bra007983.1-P	Field mustard	extracellular	52.25	52.8
Bra007982.1-P	Field mustard	extracellular	51.84	52.27
Bra033591.1-P	Field mustard	extracellular, vacuole	51.43	51.22
Bra033592.1-P	Field mustard	extracellular	51.64	51.22
Bra011882.1-P	Field mustard	extracellular	50.82	50.41
Bra019296.1-P	Field mustard	extracellular, vacuole	46.31	47.08
Bra013709.1-P	Field mustard	extracellular	45.7	46.46
Bra004846.1-P	Field mustard	nucleus	44.47	46.17
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.8	46.15
Bra019455.1-P	Field mustard	golgi, vacuole	44.26	44.44
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	43.24	44.33
Bra004845.1-P	Field mustard	extracellular	44.06	43.97
Bra004844.1-P	Field mustard	extracellular, vacuole	43.65	43.56
Bra005536.1-P	Field mustard	vacuole	45.9	42.91
Bra021821.1-P	Field mustard	vacuole	44.06	42.24
Bra027735.1-P	Field mustard	extracellular, vacuole	48.98	38.55
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.98	38.49
Bra032270.1-P	Field mustard	extracellular	43.85	35.14
Bra018765.1-P	Field mustard	vacuole	44.47	34.78

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra003946
EnsemblPlants:Bra003946.1	EnsemblPlants:Bra003946.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M4CIB3	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF28	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00025418F2	SEG:seg	:

Description

AT1G70710 (E=1e-270) ATGH9B1, CEL1 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA07:+:15913963..15917747

Molecular Weight (calculated)

54175.7 Da

IEP (calculated)

9.687

GRAVY (calculated)

-0.210

Length

488 amino acids

Sequence
(BLAST)

001: MAPSLSLVLL IVLLSSPAIY AGHDYRDALR KSIMFFEGQR SGKLPPDQRL RWRRDSALRD GSSAGVDLSG GYYDAGDNVK FGFPMAFTTT MLSWSIIDFG
101: RTMGPELKNA VKAVKWGTDY LLKATAIPGV VFVQVGDAYS DHNCWERPED MDTLRTVYKI DRAHPGSDVA GETAAALAAS SIVFRRRDPA YSRRLLDRAT
201: RVFAFANRYR GAYSNSLYHA VCPFYCDFNG YQDELLWGAA WLHKASRKRA YREFIVKNEV VLRAGDTINE FGWDNKHAGI NVLISKEVLM GKAEYFESFK
301: QNADGFICSI LPGVSHPQVQ YSRGGLLVKT GGSNMQHVTS LSFLLLAYSN YLSHAKKVVP CGELTASPSL LRQVAKRQVD YILGDNPLGM SYMVGYGRRF
401: PRRIHHRGSS VPSVSAHPAR IGCKEGSRYF LSPNPNPNLL VGAVVGGPNV TDAFPDSRPY FVQSEPTTYI NAPLVGLLGY FSTHSSWR

Best Arabidopsis Sequence Match ( AT1G70710.1 )
(BLAST)

001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR

Arabidopsis Description

CEL1Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.