Factsheet for Os06t0256900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G207600.1	Wheat	extracellular	86.72	86.37
TraesCS7A01G204500.1	Wheat	extracellular	87.32	86.28
HORVU7Hr1G041610.1	Barley	vacuole	87.12	86.25
Os02t0733300-01	Rice	extracellular	88.13	86.22
Zm00001d037338_P001	Maize	vacuole	84.1	83.6
TraesCS7B01G111700.1	Wheat	extracellular	86.52	81.44
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	78.27	77.96
CDX68334	Canola	endoplasmic reticulum	71.83	73.16
Bra003946.1-P	Field mustard	extracellular	71.83	73.16
CDY23486	Canola	extracellular	71.63	72.95
KRH41678	Soybean	nucleus	72.03	72.91
EER89549	Sorghum	mitochondrion	82.29	72.78
KRH60381	Soybean	nucleus	71.43	72.15
PGSC0003DMT400023082	Potato	extracellular, vacuole	70.83	71.98
Bra016192.1-P	Field mustard	extracellular, vacuole	72.03	71.74
CDX96271	Canola	extracellular, vacuole	72.03	71.74
CDY11552	Canola	endoplasmic reticulum, extracellular	71.43	71.14
AT1G70710.1	Thale cress	vacuole	70.22	70.94
Solyc09g010210.2.1	Tomato	plastid	69.62	70.76
CDY04737	Canola	extracellular, vacuole	70.02	70.73
AT1G23210.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	69.42	70.55
Bra024571.1-P	Field mustard	extracellular	70.02	70.45
CDY21424	Canola	extracellular	70.02	70.45
Os01t0312800-01	Rice	extracellular	59.15	58.92
Os09t0530200-01	Rice	mitochondrion	58.75	56.7
Os02t0123700-01	Rice	extracellular	54.93	54.27
Os08t0114200-01	Rice	plastid	55.73	52.96
Os04t0443300-00	Rice	vacuole	53.12	52.8
Os08t0387400-01	Rice	extracellular	46.48	44.77
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	45.27	43.95
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	47.08	43.82
Os09t0394300-01	Rice	extracellular, vacuole	38.23	43.08
Os08t0425300-00	Rice	extracellular	45.47	42.72
Os02t0778600-01	Rice	plasma membrane	42.45	42.12
Os02t0738600-01	Rice	mitochondrion	46.28	41.59
Os06t0247900-01	Rice	cytosol	36.42	39.61
Os01t0219600-00	Rice	mitochondrion	49.9	38.75
Os05t0212300-01	Rice	extracellular, vacuole	48.09	38.0
Os01t0220100-01	Rice	extracellular, vacuole	48.69	37.81
Os04t0674800-01	Rice	extracellular	44.87	35.68

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	EntrezGene:4340679	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:AK060686	ProteinID:BAD46308.1	ProteinID:BAF19232.1	ProteinID:BAS97102.1	ProteinID:EAZ36529.1	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0071555	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS
InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EnsemblPlantsGene:Os06g0256900	EnsemblPlants:Os06t0256900-01	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF99	UniProt:Q652F9	SUPFAM:SSF48208	SignalP:SignalP-noTM
UniParc:UPI000043A540	RefSeq:XP_015641944.1	SEG:seg	:	:	:

Description

glycoside hydrolase OsGH9B3Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4). (Os06t0256900-01)

Coordinates

chr6:-:8178991..8184548

Molecular Weight (calculated)

54387.0 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.202

Length

497 amino acids

Sequence
(BLAST)

001: MAAAGGAVLL LVLATATSVT GQHDYSDALH KSILFFEGQR SGRLPPDQRL RWRRDSALND GATAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG
101: RSFGAHAAEA REAVRWATDY LMKATATPNT VYVQVGDAFR DHSCWERPED MDTPRTVYKV DPSHPGSDVA AETAAALAAA SIVFRDADPD YSNRLLDRAI
201: QVFEFADKYR GPYSSSLHAA VCPCYCDYSG YKDELLWGAA WLHKASRRRE YRDYIKRNEV VLGASEAINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR
301: VNADNFICTL LPGISNHPQI QYSPGGLLFK VGNSNMQHVT SLSFLLLAYS NYLSHANVRV PCGTSSASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGSR
401: YPLRIHHRGS SLPSVAAHPA QIGCKAGATY YASAAPNPNL LVGAVVGGPS NTSDAFPDAR AVFQQSEPTT YINAPLLGLL AYFSAHPNLA QSDLLYD

Best Arabidopsis Sequence Match ( AT1G70710.1 )
(BLAST)

001: MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI
101: IDFGKTMGPE LRNAVKAVKW GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA LAAASIVFRK RDPAYSRLLL
201: DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF
301: ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY
401: GQKFPRRIHH RGSSVPSVSA HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG LLGYFSAHST WR

Arabidopsis Description

CEL1Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.