Factsheet for Os08t0387400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23560.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G090100.1	Wheat	extracellular	78.68	80.72
TraesCS1B01G107700.1	Wheat	extracellular	78.68	80.24
TraesCS1A01G088700.1	Wheat	extracellular	77.91	79.45
Zm00001d032271_P001	Maize	extracellular	74.81	75.54
EES13778	Sorghum	extracellular	75.58	75.44
HORVU1Hr1G019520.1	Barley	golgi, mitochondrion, vacuole	77.52	75.05
CDX94202	Canola	vacuole	55.62	59.79
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	58.14	59.64
Bra019296.1-P	Field mustard	extracellular, vacuole	55.43	59.58
CDY10945	Canola	extracellular, vacuole	55.43	59.58
Bra013709.1-P	Field mustard	extracellular	55.23	59.38
CDY44116	Canola	extracellular	55.23	59.38
CDY10895	Canola	extracellular	54.65	58.75
AT4G09740.1	Thale cress	extracellular	54.26	58.58
KRH27886	Soybean	extracellular	57.75	58.32
AT4G23560.1	Thale cress	extracellular	54.07	58.25
Solyc08g081620.2.1	Tomato	extracellular	55.81	57.48
PGSC0003DMT400031762	Potato	extracellular	55.81	57.37
Os01t0312800-01	Rice	extracellular	45.74	47.29
Os08t0114200-01	Rice	plastid	47.48	46.85
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	44.77	46.48
Os02t0733300-01	Rice	extracellular	45.35	46.06
Os04t0443300-00	Rice	vacuole	44.57	46.0
Os02t0123700-01	Rice	extracellular	44.57	45.73
Os02t0778600-01	Rice	plasma membrane	43.41	44.71
Os09t0530200-01	Rice	mitochondrion	44.57	44.66
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	44.19	44.53
Os02t0151300-01	Rice	endoplasmic reticulum, extracellular, vacuole	43.8	42.32
Os08t0425300-00	Rice	extracellular	42.05	41.02
Os09t0394300-01	Rice	extracellular, vacuole	33.91	39.68
Os02t0738600-01	Rice	mitochondrion	42.25	39.42
Os06t0247900-01	Rice	cytosol	33.14	37.42
Os01t0219600-00	Rice	mitochondrion	44.96	36.25
Os05t0212300-01	Rice	extracellular, vacuole	43.41	35.61
Os01t0220100-01	Rice	extracellular, vacuole	43.41	35.0
Os04t0674800-01	Rice	extracellular	42.25	34.88

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	EntrezGene:4345463	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:AK071784	ProteinID:BAD05437.1	ProteinID:BAF23627.1	ProteinID:BAT05264.1	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0030245	GO:GO:0071555	InterPro:Glyco_hydro_9	InterPro:IPR012341	EnsemblPlantsGene:Os08g0387400
EnsemblPlants:Os08t0387400-01	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF22	UniProt:Q6ZA06	SUPFAM:SSF48208
SignalP:SignalP-noTM	UniParc:UPI000022F23D	RefSeq:XP_015650922.1	SEG:seg	:	:

Description

glycoside hydrolase OsGH9B13Similar to Cellulase (Fragment). (Os08t0387400-01)

Coordinates

chr8:+:18305366..18309363

Molecular Weight (calculated)

55113.4 Da

IEP (calculated)

5.488

GRAVY (calculated)

-0.199

Length

516 amino acids

Sequence
(BLAST)

001: MAAGMVATMV LLTCLAAGGL VVGAEEDGGG GGLGRLGSPD YGDALAKAIL FFEGQRSGRL PANQRATWRG DSALTDGREE NVNLTGGYYD AGDNVKFGYP
101: MAFTVTLLGW SAVEYGAAVA AAGELGNLRA AIRWGADFLL RAHASPTTLY TQVGDGNADH QCWERPEDMD TPRTLYKITA DSPGSEAAAE ASAALAAAYV
201: ALKDDGDTAF SSRLLAASRS LFDFANNYRG SFQSSCPFYC SYSGFQDELL WASAWLFKAT RDAKYLDFLT NNQGSSNPVN EFSWDNKYAG AQMLAAQEYL
301: GGRTQLARYK DNLDSFVCAL MPNSGNVQIR TTPGGLLFTR DSVNLQYTTT ATLVLSIYSK VLKSSGSRGV RCSAATFSPN QISSFATSQV DYILGKNPLG
401: MSYMVGFSTK FPRRIHHRGS SIPSIKVLSR KVTCKEGFSS WLPTSDPNPN IHVGAIVGGP DGNDQFSDNR GDSSHSEPAT YINAAFVGAC AAAMGQKQVV
501: KLEEPADNLE SMVSTY

Best Arabidopsis Sequence Match ( AT4G23560.1 )
(BLAST)

001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG

Arabidopsis Description

AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.