Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G23560.1 | CDX89318 | AT4G26630.1 | 25387881 |
| AT4G23560.1 | CDX94304 | AT4G26630.1 | 25387881 |
| AT4G23560.1 | CDX97358 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44116 | Canola | extracellular | 96.67 | 96.67 |
| AT4G23560.1 | Thale cress | extracellular | 85.42 | 85.59 |
| CDX94202 | Canola | vacuole | 85.42 | 85.42 |
| CDY10945 | Canola | extracellular, vacuole | 85.21 | 85.21 |
| AT4G09740.1 | Thale cress | extracellular | 82.71 | 83.05 |
| VIT_02s0025g00430.t01 | Wine grape | extracellular, vacuole | 70.21 | 67.0 |
| KRH27886 | Soybean | extracellular | 70.21 | 65.95 |
| PGSC0003DMT400031762 | Potato | extracellular | 67.71 | 64.74 |
| Solyc08g081620.2.1 | Tomato | extracellular | 67.08 | 64.27 |
| TraesCS1D01G090100.1 | Wheat | extracellular | 58.75 | 56.06 |
| TraesCS1B01G107700.1 | Wheat | extracellular | 58.54 | 55.53 |
| TraesCS1A01G088700.1 | Wheat | extracellular | 58.12 | 55.14 |
| EES13778 | Sorghum | extracellular | 59.17 | 54.93 |
| Os08t0387400-01 | Rice | extracellular | 58.75 | 54.65 |
| Zm00001d032271_P001 | Maize | extracellular | 58.12 | 54.6 |
| HORVU1Hr1G019520.1 | Barley | golgi, mitochondrion, vacuole | 58.54 | 52.72 |
| CDY32480 | Canola | extracellular, vacuole | 52.92 | 49.61 |
| CDY60076 | Canola | extracellular | 25.0 | 49.59 |
| CDY37459 | Canola | endoplasmic reticulum, extracellular | 52.08 | 49.02 |
| CDY42599 | Canola | cytosol | 47.71 | 48.21 |
| CDX97262 | Canola | vacuole | 51.46 | 48.05 |
| CDY12503 | Canola | extracellular, vacuole | 48.12 | 47.83 |
| CDY37936 | Canola | extracellular | 45.42 | 47.81 |
| CDX96319 | Canola | extracellular, plastid, vacuole | 48.12 | 47.73 |
| CDY22043 | Canola | extracellular, vacuole | 51.46 | 47.68 |
| CDY25758 | Canola | extracellular, vacuole | 47.92 | 47.62 |
| CDY03687 | Canola | extracellular | 47.92 | 47.52 |
| CDY66787 | Canola | extracellular, plastid, vacuole | 47.92 | 47.52 |
| CDY52780 | Canola | extracellular, vacuole | 51.04 | 47.3 |
| CDY03686 | Canola | extracellular | 47.29 | 47.0 |
| CDX83426 | Canola | extracellular, plastid, vacuole | 46.67 | 46.76 |
| CDY41955 | Canola | extracellular, vacuole | 48.12 | 46.67 |
| CDX74666 | Canola | vacuole | 47.5 | 46.63 |
| CDY37939 | Canola | extracellular, vacuole | 46.88 | 46.58 |
| CDY04737 | Canola | extracellular, vacuole | 47.5 | 46.34 |
| CDX68334 | Canola | endoplasmic reticulum | 46.88 | 46.11 |
| CDY47675 | Canola | vacuole | 46.88 | 46.01 |
| CDY21424 | Canola | extracellular | 47.29 | 45.95 |
| CDY23486 | Canola | extracellular | 46.67 | 45.9 |
| CDX74668 | Canola | extracellular | 47.08 | 45.84 |
| CDX74667 | Canola | extracellular, vacuole | 41.25 | 45.73 |
| CDX74664 | Canola | extracellular, vacuole | 46.25 | 45.4 |
| CDY47674 | Canola | extracellular, vacuole | 46.46 | 45.23 |
| CDX95605 | Canola | extracellular, vacuole | 46.88 | 45.09 |
| CDY11552 | Canola | endoplasmic reticulum, extracellular | 46.67 | 44.89 |
| CDX96271 | Canola | extracellular, vacuole | 46.67 | 44.89 |
| CDY12319 | Canola | cytosol, extracellular, vacuole | 45.42 | 44.86 |
| CDX87948 | Canola | extracellular, vacuole | 45.42 | 44.86 |
| CDY30943 | Canola | golgi, vacuole | 45.42 | 44.86 |
| CDY21221 | Canola | golgi, vacuole | 45.42 | 44.86 |
| CDY01915 | Canola | cytosol | 33.54 | 44.35 |
| CDY42597 | Canola | extracellular | 42.71 | 43.9 |
| CDY19428 | Canola | vacuole | 47.5 | 43.68 |
| CDY17123 | Canola | vacuole | 47.29 | 43.49 |
| CDY19174 | Canola | vacuole | 47.5 | 43.26 |
| CDY41954 | Canola | vacuole | 41.88 | 43.04 |
| CDY23776 | Canola | vacuole | 47.08 | 42.97 |
| CDY22399 | Canola | extracellular | 43.96 | 42.89 |
| CDX72723 | Canola | extracellular | 43.75 | 42.68 |
| CDY22400 | Canola | extracellular, vacuole | 40.62 | 41.94 |
| CDY34422 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.54 | 37.58 |
| CDY47849 | Canola | extracellular, vacuole | 48.54 | 37.58 |
| CDY46529 | Canola | extracellular, vacuole | 48.33 | 37.36 |
| CDY05130 | Canola | extracellular, vacuole | 48.33 | 37.06 |
| CDX90780 | Canola | endoplasmic reticulum, extracellular | 48.12 | 36.9 |
| CDY65179 | Canola | extracellular | 47.5 | 36.42 |
| CDY60075 | Canola | vacuole | 47.29 | 36.26 |
| CDX93707 | Canola | vacuole | 46.67 | 35.9 |
| CDY59895 | Canola | cytosol, vacuole | 35.21 | 33.33 |
| CDY08373 | Canola | cytosol, extracellular, mitochondrion, nucleus | 25.83 | 29.38 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | GO:A0A078F8V2 |
| UniProt:A0A078F8V2 | EnsemblPlants:CDY10895 | ProteinID:CDY10895 | ProteinID:CDY10895.1 | GO:GO:0000272 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | EnsemblPlantsGene:GSBRNA2T00048797001 |
| InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | PFAM:PF00759 | ScanProsite:PS00592 |
| ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF22 | MetaCyc:PWY-6788 | SUPFAM:SSF48208 | SignalP:SignalP-noTM |
| UniParc:UPI0004EDB2D8 | SEG:seg | : | : | : | : |
Description
BnaC01g15100DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078F8V2]
Coordinates
chrLK032007:+:709185..711669
Molecular Weight (calculated)
52854.7 Da
IEP (calculated)
5.252
GRAVY (calculated)
-0.281
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKILVIMLV CIFMAFQSLE ALDYGDALNK SILFFEGQRS GKLPVNQRVT WRADSALSDG KPDNVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLSY LRSSIKWATD FIILAHASPT TLYTHVGDGN SDHSCWERPE DMDTARTLYK INSSSPGSEA AGEAAAALAS AALVFETVDS NYSSKLLSHA
201: KSLFEFADQY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGENKYISY VISNQDWSQA VNEFSWDNKF AGAQALLASE FYKGKNDLGK FKKDVESFIC
301: ALMPGSSSQQ IEPTPGGLLF TRDSSNIQYV TTAITVLFHY SKTLTQAQVG SIQCGSTKFT VSQIQNFSKS QVDYILGNNP MKMSYMVGYG NKYPTQLHHR
401: GSSLPSIKSK PEKIDCNGGY SYYNSDQPNP NVHTGAIVGG PDSSDEFSDE RSDYSHAEPT TYINAAFIGP VAALIGLKSN
101: EISSVNQLSY LRSSIKWATD FIILAHASPT TLYTHVGDGN SDHSCWERPE DMDTARTLYK INSSSPGSEA AGEAAAALAS AALVFETVDS NYSSKLLSHA
201: KSLFEFADQY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGENKYISY VISNQDWSQA VNEFSWDNKF AGAQALLASE FYKGKNDLGK FKKDVESFIC
301: ALMPGSSSQQ IEPTPGGLLF TRDSSNIQYV TTAITVLFHY SKTLTQAQVG SIQCGSTKFT VSQIQNFSKS QVDYILGNNP MKMSYMVGYG NKYPTQLHHR
401: GSSLPSIKSK PEKIDCNGGY SYYNSDQPNP NVHTGAIVGG PDSSDEFSDE RSDYSHAEPT TYINAAFIGP VAALIGLKSN
001: MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG
101: EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
201: KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
301: AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
401: GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK KSDYSHAEPT TYINAAFIGP VAALISSSG
Arabidopsis Description
AtGH9B15Endoglucanase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.