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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21221 Canola golgi, vacuole 100.0 100.0
Bra019455.1-P Field mustard golgi, vacuole 99.79 99.79
CDY12319 Canola cytosol, extracellular, vacuole 90.53 90.53
CDX87948 Canola extracellular, vacuole 90.33 90.33
AT3G43860.1 Thale cress extracellular, vacuole 86.83 86.83
VIT_04s0008g02020.t01 Wine grape vacuole 69.96 69.96
KRH52262 Soybean extracellular, vacuole 67.49 67.91
KRH52260 Soybean extracellular, vacuole 67.08 67.49
Solyc06g066120.2.1 Tomato extracellular, vacuole 65.84 65.84
VIT_04s0008g02010.t01 Wine grape vacuole 65.84 65.44
PGSC0003DMT400052749 Potato extracellular, vacuole 64.81 64.81
Os02t0778600-01 Rice plasma membrane 62.96 61.08
EES05890 Sorghum vacuole 61.32 59.96
GSMUA_Achr6P22750_001 Banana vacuole 63.79 59.62
TraesCS6B01G368000.1 Wheat extracellular 61.11 59.52
TraesCS6D01G318100.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.73 59.06
TraesCS6A01G337300.1 Wheat mitochondrion 61.52 58.97
HORVU6Hr1G081500.1 Barley plastid 61.52 57.39
CDY10945 Canola extracellular, vacuole 47.74 48.33
CDX94202 Canola vacuole 47.53 48.12
CDY12503 Canola extracellular, vacuole 46.71 47.0
CDY25758 Canola extracellular, vacuole 46.5 46.79
CDX96319 Canola extracellular, plastid, vacuole 46.09 46.28
CDY66787 Canola extracellular, plastid, vacuole 45.88 46.07
CDY32480 Canola extracellular, vacuole 48.35 45.9
CDX74666 Canola vacuole 46.09 45.81
CDX74667 Canola extracellular, vacuole 40.74 45.73
CDX97262 Canola vacuole 48.35 45.72
CDY03687 Canola extracellular 45.47 45.66
CDX74664 Canola extracellular, vacuole 45.88 45.6
CDY37939 Canola extracellular, vacuole 45.27 45.55
CDY37459 Canola endoplasmic reticulum, extracellular 47.74 45.49
CDX74668 Canola extracellular 46.09 45.44
CDY44116 Canola extracellular 44.86 45.42
CDY10895 Canola extracellular 44.86 45.42
CDY47675 Canola vacuole 45.47 45.19
CDY22043 Canola extracellular, vacuole 48.15 45.17
CDY03686 Canola extracellular 44.65 44.93
CDY42599 Canola cytosol 43.83 44.84
CDY47674 Canola extracellular, vacuole 45.47 44.83
CDY52780 Canola extracellular, vacuole 47.74 44.79
CDY37936 Canola extracellular 41.77 44.52
CDY04737 Canola extracellular, vacuole 45.06 44.51
CDY21424 Canola extracellular 45.06 44.33
CDY23486 Canola extracellular 44.24 44.06
CDX68334 Canola endoplasmic reticulum 44.24 44.06
CDX83426 Canola extracellular, plastid, vacuole 43.0 43.63
CDX96271 Canola extracellular, vacuole 44.65 43.49
CDY11552 Canola endoplasmic reticulum, extracellular 44.65 43.49
CDY60076 Canola extracellular 21.6 43.39
CDY41955 Canola extracellular, vacuole 44.03 43.23
CDX95605 Canola extracellular, vacuole 43.83 42.69
CDY22399 Canola extracellular 43.0 42.48
CDX72723 Canola extracellular 42.8 42.28
CDY17123 Canola vacuole 44.65 41.57
CDY19428 Canola vacuole 44.65 41.57
CDY41954 Canola vacuole 39.92 41.54
CDY42597 Canola extracellular 39.71 41.33
CDY23776 Canola vacuole 44.24 40.87
CDY19174 Canola vacuole 44.03 40.61
CDY22400 Canola extracellular, vacuole 38.07 39.78
CDY01915 Canola cytosol 29.63 39.67
CDY47849 Canola extracellular, vacuole 46.3 36.29
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 46.3 36.29
CDY46529 Canola extracellular, vacuole 46.3 36.23
CDY05130 Canola extracellular, vacuole 45.68 35.46
CDX90780 Canola endoplasmic reticulum, extracellular 45.68 35.46
CDX93707 Canola vacuole 42.8 33.33
CDY65179 Canola extracellular 42.18 32.75
CDY60075 Canola vacuole 42.18 32.75
CDY59895 Canola cytosol, vacuole 32.1 30.77
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 23.87 27.49
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078G726
UniProt:A0A078G726ProteinID:CDY21221.1EnsemblPlants:CDY30943ProteinID:CDY30943ProteinID:CDY30943.1GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00046506001InterPro:Glyco_hydro_9InterPro:IPR012341
PFAM:PF00759PANTHER:PTHR22298PANTHER:PTHR22298:SF31MetaCyc:PWY-6788SUPFAM:SSF48208TMHMM:TMhelix
UniParc:UPI0004EEB246SEG:seg::::
Description
BnaA06g19700DBnaA06g19700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G726]
Coordinates
chrLK032264:-:299458..302344
Molecular Weight (calculated)
53807.0 Da
IEP (calculated)
7.757
GRAVY (calculated)
-0.229
Length
486 amino acids
Sequence
(BLAST)
001: MGSPGDKARR NVVIRAILLG LISIVCVNGT IINYKEALTK SLIFLEAQRS GKLPPNNRVP WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT
101: LAWSTINYEK ELHAAGELEN TRAAIRWGTD YLLKCASREN HLYVQVGDPN ADHKCWARPE NMQTPRTVLE ISDKDPGTEI AAETAAALAA SSIVFRHIDH
201: MYSRQLLNKA KLLFKLAKSH KGTYDGACPF YCSNSGYNDE LLWAATWLYK ATRIEVYLSY LKFEAISAYV AEFSWDLKYA GAQILILEMI FEGAKGLDLY
301: KQQADSFICS NIPESQYHQV FTTPGGLIHL RDGANTQYVT ATAFLFSAYA DILQKHNQKI TCGSKQFDST NLMAFAKKQI DYILGHNPKG RSYMVGFGPN
401: PPMQAHHRGA SVPVAEGNEP LSCPMSFVKW FNKNQPNANE LTGAIVGGPD RQDNFQDFRW TSAYTEPCTY INSIAVGVLA KLAATA
Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)
001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
Arabidopsis Description
AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.