CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018765.1-P	Field mustard	vacuole	99.36	99.36
CDY59895	Canola	cytosol, vacuole	78.21	96.25
CDY65179	Canola	extracellular	92.15	91.85
CDY60075	Canola	vacuole	92.15	91.85
CDY60076	Canola	extracellular	35.58	91.74
AT1G48930.1	Thale cress	vacuole	90.54	90.11
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	67.47	68.46
PGSC0003DMT400051238	Potato	extracellular	68.27	67.41
Solyc02g014220.2.1	Tomato	extracellular	67.31	66.46
KRH24186	Soybean	extracellular, vacuole	66.83	66.3
KRH29156	Soybean	extracellular, vacuole	65.87	65.55
GSMUA_Achr2P03770_001	Banana	vacuole	56.89	58.29
EES13091	Sorghum	vacuole	55.45	54.92
Os04t0674800-01	Rice	extracellular	54.97	54.88
Zm00001d026605_P001	Maize	vacuole	54.33	54.24
TraesCS2D01G557500.1	Wheat	extracellular	52.88	53.48
HORVU2Hr1G120100.1	Barley	extracellular	52.24	52.92
CDY19428	Canola	vacuole	44.23	52.87
CDY17123	Canola	vacuole	44.23	52.87
TraesCS2B01G586600.1	Wheat	extracellular	51.6	52.44
CDY23776	Canola	vacuole	43.75	51.9
CDY19174	Canola	vacuole	43.75	51.8
CDX74666	Canola	vacuole	40.38	51.53
CDX74667	Canola	extracellular, vacuole	35.58	51.27
CDY47675	Canola	vacuole	40.06	51.12
TraesCS2A01G556300.1	Wheat	vacuole	52.72	51.01
CDY47674	Canola	extracellular, vacuole	40.06	50.71
CDX90780	Canola	endoplasmic reticulum, extracellular	50.48	50.32
CDY05130	Canola	extracellular, vacuole	50.48	50.32
CDX74668	Canola	extracellular	39.74	50.3
CDX74664	Canola	extracellular, vacuole	39.26	50.1
CDX83426	Canola	extracellular, plastid, vacuole	38.3	49.9
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	48.4	48.71
CDY47849	Canola	extracellular, vacuole	48.24	48.55
CDY46529	Canola	extracellular, vacuole	48.24	48.47
CDX95605	Canola	extracellular, vacuole	38.46	48.1
CDY44116	Canola	extracellular	36.7	47.71
CDY10945	Canola	extracellular, vacuole	36.54	47.5
CDX94202	Canola	vacuole	36.38	47.29
CDY10895	Canola	extracellular	35.9	46.67
CDY25758	Canola	extracellular, vacuole	35.26	45.55
CDY12503	Canola	extracellular, vacuole	35.1	45.34
CDY22399	Canola	extracellular	35.58	45.12
CDX96319	Canola	extracellular, plastid, vacuole	34.94	45.04
CDY41954	Canola	vacuole	33.49	44.75
CDY66787	Canola	extracellular, plastid, vacuole	34.62	44.63
CDY21424	Canola	extracellular	35.26	44.53
CDY04737	Canola	extracellular, vacuole	35.1	44.51
CDX68334	Canola	endoplasmic reticulum	34.78	44.47
CDX72723	Canola	extracellular	34.94	44.31
CDY23486	Canola	extracellular	34.62	44.26
CDY37939	Canola	extracellular, vacuole	34.13	44.1
CDY03686	Canola	extracellular	34.13	44.1
CDX96271	Canola	extracellular, vacuole	35.1	43.89
CDY11552	Canola	endoplasmic reticulum, extracellular	35.1	43.89
CDY37936	Canola	extracellular	32.05	43.86
CDX87948	Canola	extracellular, vacuole	33.97	43.62
CDY12319	Canola	cytosol, extracellular, vacuole	33.97	43.62
CDY42599	Canola	cytosol	33.17	43.58
CDY22400	Canola	extracellular, vacuole	32.37	43.44
CDY03687	Canola	extracellular	33.65	43.39
CDY32480	Canola	extracellular, vacuole	35.58	43.36
CDY42597	Canola	extracellular	32.37	43.25
CDY22043	Canola	extracellular, vacuole	35.9	43.24
CDY52780	Canola	extracellular, vacuole	35.74	43.05
CDX97262	Canola	vacuole	35.42	43.0
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	29.01	42.89
CDY30943	Canola	golgi, vacuole	33.33	42.8
CDY21221	Canola	golgi, vacuole	33.33	42.8
CDY41955	Canola	extracellular, vacuole	33.81	42.63
CDY37459	Canola	endoplasmic reticulum, extracellular	34.78	42.55
CDY01915	Canola	cytosol	22.76	39.12

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:A0A078DXS4
InterPro:CBM_49	EnsemblPlants:CDX93707	ProteinID:CDX93707	ProteinID:CDX93707.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0016787	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00156404001	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	MetaCyc:PWY-6788
SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEF894	SEG:seg

Description

BnaA06g03410D

Coordinates

chrLK031876:-:1464165..1466875

Molecular Weight (calculated)

69138.5 Da

IEP (calculated)

9.323

GRAVY (calculated)

-0.383

Length

624 amino acids

Sequence
(BLAST)

001: MSKFGRSLLG VSLLLTVLLA AATTAAEYYN YGSALDKTFL FFEAQRSGKL PATQRVKWRG HSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFSVTMLSW
101: AAVDNRKELF GLNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGQSDH YCWERAEDMT TSRTAYKLDQ YHPGSDLAGE TAAAFAAASL AFKPYNSSYS
201: AILLSHAKEL FSFADKYRGL YTDSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY TIDNAGYMGG TGWGMKEFSW DNKYAGVQVL LSKVLLEGKG
301: GPYTSTLKQY QMKADYFSCA CLKKNGGYNI QTTPGGLMYV REWNNLQYSS AAAFLLAIYS DYISAANAKL NCPDGSVQPQ ALLDFARSQA DYILGKNRQG
401: MSYLVGYGPK YPIRVHHRGA SVPSIFVQHS SVSCVQGFDS WYRRAQADPN VIHGALVGGP DQNDNYSDDR TNYEQSEPTL SGTAPLVGLF AKLSVGSYGG
501: GYSKPYQTTK PPASSYKATP TTYTPKQSGA PIEFLHSITA NWMAGNTRYY RHKVIIKNNS QKQISDLKLK IEDLSGPIWG LIPTGQKNTY QLPQWQKRLR
601: AGQTHDFVYV QGGPQAKVSV LSYY

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.