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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, vacuole
Any Predictor:cytosol, extracellular, nucleus, vacuole
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034983.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 90.95 100.0
CDX87948 Canola extracellular, vacuole 99.59 99.59
CDY30943 Canola golgi, vacuole 90.53 90.53
CDY21221 Canola golgi, vacuole 90.53 90.53
AT3G43860.1 Thale cress extracellular, vacuole 88.48 88.48
VIT_04s0008g02020.t01 Wine grape vacuole 70.58 70.58
KRH52262 Soybean extracellular, vacuole 67.9 68.32
KRH52260 Soybean extracellular, vacuole 67.7 68.12
VIT_04s0008g02010.t01 Wine grape vacuole 67.08 66.67
Solyc06g066120.2.1 Tomato extracellular, vacuole 65.02 65.02
PGSC0003DMT400052749 Potato extracellular, vacuole 63.99 63.99
Os02t0778600-01 Rice plasma membrane 62.55 60.68
EES05890 Sorghum vacuole 61.73 60.36
TraesCS6B01G368000.1 Wheat extracellular 60.91 59.32
TraesCS6D01G318100.1 Wheat endoplasmic reticulum, extracellular, vacuole 61.52 58.86
GSMUA_Achr6P22750_001 Banana vacuole 62.96 58.85
TraesCS6A01G337300.1 Wheat mitochondrion 61.32 58.78
HORVU6Hr1G081500.1 Barley plastid 61.32 57.2
CDY10945 Canola extracellular, vacuole 47.33 47.92
CDX94202 Canola vacuole 46.91 47.5
CDY12503 Canola extracellular, vacuole 46.71 47.0
CDY25758 Canola extracellular, vacuole 46.5 46.79
CDX96319 Canola extracellular, plastid, vacuole 46.09 46.28
CDX74667 Canola extracellular, vacuole 40.95 45.96
CDY66787 Canola extracellular, plastid, vacuole 45.68 45.87
CDX74664 Canola extracellular, vacuole 45.88 45.6
CDY10895 Canola extracellular 44.86 45.42
CDY44116 Canola extracellular 44.86 45.42
CDX74668 Canola extracellular 45.88 45.23
CDX74666 Canola vacuole 45.47 45.19
CDY32480 Canola extracellular, vacuole 47.53 45.12
CDX68334 Canola endoplasmic reticulum 45.27 45.08
CDY47675 Canola vacuole 45.27 44.99
CDY04737 Canola extracellular, vacuole 45.47 44.92
CDY23486 Canola extracellular 45.06 44.88
CDX97262 Canola vacuole 47.33 44.75
CDY21424 Canola extracellular 45.47 44.74
CDY37939 Canola extracellular, vacuole 44.44 44.72
CDY37459 Canola endoplasmic reticulum, extracellular 46.91 44.71
CDY03687 Canola extracellular 44.44 44.63
CDY47674 Canola extracellular, vacuole 45.06 44.42
CDY42599 Canola cytosol 43.42 44.42
CDY03686 Canola extracellular 44.03 44.31
CDX96271 Canola extracellular, vacuole 45.47 44.29
CDY22043 Canola extracellular, vacuole 47.12 44.21
CDY11552 Canola endoplasmic reticulum, extracellular 45.27 44.09
CDY52780 Canola extracellular, vacuole 46.91 44.02
CDY37936 Canola extracellular 41.15 43.86
CDY60076 Canola extracellular 21.81 43.8
CDX83426 Canola extracellular, plastid, vacuole 42.8 43.42
CDY41955 Canola extracellular, vacuole 43.62 42.83
CDX95605 Canola extracellular, vacuole 43.62 42.48
CDY17123 Canola vacuole 45.27 42.15
CDY19428 Canola vacuole 45.27 42.15
CDY22399 Canola extracellular 42.59 42.07
CDX72723 Canola extracellular 42.59 42.07
CDY23776 Canola vacuole 44.86 41.44
CDY19174 Canola vacuole 44.65 41.18
CDY42597 Canola extracellular 39.3 40.9
CDY41954 Canola vacuole 39.3 40.9
CDY22400 Canola extracellular, vacuole 38.27 40.0
CDY01915 Canola cytosol 28.6 38.29
CDY47849 Canola extracellular, vacuole 47.12 36.94
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 47.12 36.94
CDY46529 Canola extracellular, vacuole 47.12 36.88
CDY05130 Canola extracellular, vacuole 46.71 36.26
CDX90780 Canola endoplasmic reticulum, extracellular 46.71 36.26
CDX93707 Canola vacuole 43.62 33.97
CDY65179 Canola extracellular 42.8 33.23
CDY60075 Canola vacuole 42.8 33.23
CDY59895 Canola cytosol, vacuole 32.92 31.56
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 24.49 28.2
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078FH28
UniProt:A0A078FH28EnsemblPlants:CDY12319ProteinID:CDY12319ProteinID:CDY12319.1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00061417001InterPro:Glyco_hydro_9InterPro:IPR012341PFAM:PF00759
PANTHER:PTHR22298PANTHER:PTHR22298:SF31MetaCyc:PWY-6788SUPFAM:SSF48208TMHMM:TMhelixUniParc:UPI0004EE479D
SEG:seg:::::
Description
BnaA06g20250DBnaA06g20250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH28]
Coordinates
chrLK032020:-:24258..27318
Molecular Weight (calculated)
54136.6 Da
IEP (calculated)
9.124
GRAVY (calculated)
-0.282
Length
486 amino acids
Sequence
(BLAST)
001: MGNHGEKERG NVVIRAILLG LISIVCVNGT NINYKEALTK SLIFLEAQRS GKLPPNNRVP WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT
101: LAWSTIYYDK ELRASGELEN ARAAIRWGTD YFLKCASRKN RLYVQVGDPH LDHKCWARPE NMQTARTVLQ ISDKDPGTEI AAETAAALAA SSIVFRRIDH
201: KYSRRLLNKA KLLFKLAKSH KGSYDGACPF YCSCSGYNDE LLWAATWLYK ATRKQVYLSY LKFEAISGYV AEFSWDLKYA GAQMLIVKMI FEGTKGLDLY
301: KQQADSFICS NLPGSPYHQV FNTPGGMIHL RDGANTQYVT ATAFLFSAYA DILQKYNQKI FCGSKQFDST HLMAFAKKQI DYILGHNPQG RSYMVGFGPN
401: PPKQAHHRGA SVPMSEANEP LSCPLSFVKW FNKNQPNANE LTGAIVGGPD RQDNFQDFRW TSVYTEPCTY INSIAVGILA KLAATA
Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)
001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
Arabidopsis Description
AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.