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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • vacuole 4
  • extracellular 4
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74668 Canola extracellular 97.16 97.16
CDY47675 Canola vacuole 80.32 80.98
AT2G44560.1 Thale cress extracellular, vacuole 80.53 80.86
CDX74666 Canola vacuole 79.92 80.57
CDX74667 Canola extracellular, vacuole 69.57 79.21
AT2G44540.1 Thale cress vacuole 78.5 78.82
CDX74664 Canola extracellular, vacuole 78.09 78.73
AT2G44550.1 Thale cress extracellular, plasma membrane, vacuole 77.48 77.96
CDX83426 Canola extracellular, plastid, vacuole 73.63 75.78
CDX95605 Canola extracellular, vacuole 75.46 74.55
VIT_13s0067g01190.t01 Wine grape extracellular, vacuole 60.45 61.7
PGSC0003DMT400069884 Potato extracellular, vacuole 58.82 60.54
KRG89135 Soybean extracellular 58.82 59.79
Solyc05g052530.1.1 Tomato extracellular 58.42 59.26
VIT_13s0067g01200.t01 Wine grape extracellular, vacuole 57.4 58.96
GSMUA_Achr6P15630_001 Banana extracellular, vacuole 52.13 57.24
TraesCS1D01G075100.1 Wheat vacuole 53.35 53.67
TraesCS1D01G074700.1 Wheat extracellular, vacuole 53.35 53.67
TraesCS1D01G074900.1 Wheat cytosol, mitochondrion, plastid, vacuole 50.1 53.23
TraesCS1A01G072300.1 Wheat vacuole 53.14 53.04
TraesCS1B01G090700.1 Wheat extracellular, vacuole 52.33 52.65
HORVU1Hr1G015550.1 Barley vacuole 52.13 52.45
TraesCS1A01G072100.1 Wheat nucleus 51.93 52.24
CDY60076 Canola extracellular 25.36 51.65
TraesCS1D01G074800.1 Wheat vacuole 48.48 51.51
KXG21209 Sorghum cytosol 40.37 51.16
Zm00001d035442_P001 Maize extracellular, vacuole 41.58 49.16
Os05t0129200-00 Rice endoplasmic reticulum, extracellular, vacuole 49.9 48.05
CDY10945 Canola extracellular, vacuole 46.45 47.71
CDX94202 Canola vacuole 46.25 47.5
CDY12503 Canola extracellular, vacuole 46.04 47.0
CDY44116 Canola extracellular 45.64 46.88
CDY25758 Canola extracellular, vacuole 45.64 46.58
CDX96319 Canola extracellular, plastid, vacuole 45.64 46.49
CDY10895 Canola extracellular 45.23 46.46
CDY03687 Canola extracellular 45.23 46.07
CDY66787 Canola extracellular, plastid, vacuole 45.23 46.07
CDY03686 Canola extracellular 45.03 45.96
CDY37939 Canola extracellular, vacuole 44.83 45.76
CDY37936 Canola extracellular 42.19 45.61
CDY32480 Canola extracellular, vacuole 47.26 45.51
CDY21221 Canola golgi, vacuole 44.83 45.47
CDY30943 Canola golgi, vacuole 44.83 45.47
CDY42599 Canola cytosol 43.61 45.26
CDX87948 Canola extracellular, vacuole 44.42 45.06
CDY12319 Canola cytosol, extracellular, vacuole 44.42 45.06
CDY37459 Canola endoplasmic reticulum, extracellular 46.25 44.71
CDX68334 Canola endoplasmic reticulum 44.22 44.67
CDY23486 Canola extracellular 44.22 44.67
CDY17123 Canola vacuole 47.06 44.44
CDY19428 Canola vacuole 47.06 44.44
CDY04737 Canola extracellular, vacuole 44.22 44.31
CDY19174 Canola vacuole 47.26 44.21
CDY42597 Canola extracellular 41.78 44.11
CDY41954 Canola vacuole 41.78 44.11
CDY11552 Canola endoplasmic reticulum, extracellular 44.62 44.09
CDX96271 Canola extracellular, vacuole 44.62 44.09
CDY41955 Canola extracellular, vacuole 44.22 44.04
CDY22043 Canola extracellular, vacuole 46.25 44.02
CDY52780 Canola extracellular, vacuole 46.25 44.02
CDX97262 Canola vacuole 45.84 43.97
CDY21424 Canola extracellular 43.81 43.72
CDY22399 Canola extracellular 43.61 43.7
CDY22400 Canola extracellular, vacuole 40.97 43.44
CDY23776 Canola vacuole 46.25 43.35
CDX72723 Canola extracellular 43.2 43.29
CDX93707 Canola vacuole 50.71 40.06
CDY60075 Canola vacuole 50.3 39.62
CDY65179 Canola extracellular 50.3 39.62
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 49.29 39.19
CDY47849 Canola extracellular, vacuole 49.09 39.03
CDY01915 Canola cytosol 28.6 38.84
CDY46529 Canola extracellular, vacuole 48.88 38.81
CDY59895 Canola cytosol, vacuole 39.76 38.66
CDX90780 Canola endoplasmic reticulum, extracellular 48.88 38.5
CDY05130 Canola extracellular, vacuole 48.68 38.34
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 24.95 29.15
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078IE75
UniProt:A0A078IE75EnsemblPlants:CDY47674ProteinID:CDY47674ProteinID:CDY47674.1GO:GO:0000272GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798GO:GO:0030245EnsemblPlantsGene:GSBRNA2T00087914001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592PANTHER:PTHR22298
PANTHER:PTHR22298:SF12MetaCyc:PWY-6788SUPFAM:SSF48208SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE12AA
SEG:seg:::::
Description
BnaC04g03850DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078IE75]
Coordinates
chrLK032729:+:6133..8118
Molecular Weight (calculated)
53954.7 Da
IEP (calculated)
8.073
GRAVY (calculated)
-0.312
Length
493 amino acids
Sequence
(BLAST)
001: MSQLKNRSSQ CLWTSTICIL LLSMSSMTLG AVSRHYGEAL TKTLLYFEAQ RSGKLPSNQR VNWRGDSALR DGSDAHVDLT GGYYDAGDNM KFGFPLAFTT
101: TMLAWSSVEM ASQLKAHKEH KNVLAALKWA TDYLIKAHPE SNILYGQVGD GNSDHECWMR PEDMTTPRPS YRIDAQHPGA DLAGETAAAM AAASLAFAPY
201: NAAYAKKLIS HAKDLFEFAK AHPGVYQSSI SNAGGFYASS GYEDELLWAA AWLHRATKKQ IYLNDLNEAS NTGGTRTVFA WDDKFVGAQV LMAKLALEGK
301: VKINKKMEEY KSMAEQFICN CAQKGSNNVK ITQGGLLWFL PWNNLQYTTA ASFVLSAYSK YLKAANASIK CHGGSLQASD LRNLARAQVD YILGSNPKNM
401: SYMVGFGTNY PERPHHRGAS IVSIKKNRTA VECNAGFNDW YHSPAPNPNV LTGALVGGPD ENDAYGDERT DFQHSEPVPA TVAPFVGVLA AFA
Best Arabidopsis Sequence Match ( AT2G44560.1 )
(BLAST)
001: MSQLKIGSSQ CLWTSICIVL FVLSMARGAV SRNYGDALTK SLLYFEAQRS GKLPSNQRVT WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFFTTM
101: LAWSNIEMAT QLKAHQEQEN ALAALKWATD FLIKAHPEPN VLYGQVGDGN SDHECWMRPE DMTTPRPSFR IDAQHPGSDL AGETAAAMAA ASIAFAPSDE
201: AYAQILIGHA KELFEFAKAY PGIYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTQASGT GGPRTAFSWD DKFVGAQVLV AKLALEGKVE
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTAAT FVLSAYSKYL TDAKASIQCP NGALQASDLL DLARSQVDYI LGSNPQNMSY
401: MVGVGTNYPK KPHHRAASIV SITKDKTPVT CSEGFDAWFN NPAPNPNVLM GAVVGGPNDN DVYGDERTDY QHAEPAPATA APFVGVLAAV A
Arabidopsis Description
AtGH9B11Endoglucanase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Q4]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.