Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 91.24 | 91.43 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 86.97 | 86.97 |
| Bra004846.1-P | Field mustard | nucleus | 75.56 | 78.94 |
| CDX74668 | Canola | extracellular | 79.23 | 78.9 |
| CDY47674 | Canola | extracellular, vacuole | 78.82 | 78.5 |
| CDY47675 | Canola | vacuole | 76.37 | 76.69 |
| CDX74666 | Canola | vacuole | 75.97 | 76.28 |
| AT2G44570.1 | Thale cress | extracellular | 76.37 | 76.22 |
| CDX74667 | Canola | extracellular, vacuole | 67.01 | 75.98 |
| Bra004845.1-P | Field mustard | extracellular | 75.56 | 75.87 |
| CDX74664 | Canola | extracellular, vacuole | 74.95 | 75.26 |
| Bra004844.1-P | Field mustard | extracellular, vacuole | 74.54 | 74.85 |
| VIT_13s0067g01190.t01 | Wine grape | extracellular, vacuole | 61.91 | 62.94 |
| VIT_13s0067g01200.t01 | Wine grape | extracellular, vacuole | 60.29 | 61.67 |
| KRG89135 | Soybean | extracellular | 60.9 | 61.65 |
| PGSC0003DMT400069884 | Potato | extracellular, vacuole | 58.86 | 60.33 |
| Solyc05g052530.1.1 | Tomato | extracellular | 58.45 | 59.05 |
| GSMUA_Achr6P15630_001 | Banana | extracellular, vacuole | 52.95 | 57.91 |
| TraesCS1D01G074700.1 | Wheat | extracellular, vacuole | 55.4 | 55.51 |
| TraesCS1D01G075100.1 | Wheat | vacuole | 55.4 | 55.51 |
| TraesCS1A01G072300.1 | Wheat | vacuole | 55.6 | 55.26 |
| TraesCS1D01G074900.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 52.14 | 55.17 |
| TraesCS1B01G090700.1 | Wheat | extracellular, vacuole | 54.79 | 54.9 |
| HORVU1Hr1G015550.1 | Barley | vacuole | 54.58 | 54.69 |
| TraesCS1A01G072100.1 | Wheat | nucleus | 54.38 | 54.49 |
| TraesCS1D01G074800.1 | Wheat | vacuole | 50.71 | 53.66 |
| KXG21209 | Sorghum | cytosol | 41.34 | 52.19 |
| Os05t0129200-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 52.75 | 50.59 |
| Zm00001d035442_P001 | Maize | extracellular, vacuole | 42.57 | 50.12 |
| AT4G23560.1 | Thale cress | extracellular | 48.47 | 49.69 |
| AT4G09740.1 | Thale cress | extracellular | 46.23 | 47.49 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 47.66 | 46.71 |
| AT1G22880.1 | Thale cress | extracellular | 45.62 | 46.28 |
| AT1G71380.1 | Thale cress | extracellular | 45.42 | 46.07 |
| AT1G70710.1 | Thale cress | vacuole | 45.62 | 45.53 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 48.68 | 45.52 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 45.21 | 44.67 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 43.79 | 43.97 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 43.38 | 43.83 |
| AT4G02290.1 | Thale cress | plastid | 46.03 | 43.8 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 43.58 | 43.41 |
| AT4G11050.1 | Thale cress | vacuole | 51.53 | 40.42 |
| AT1G48930.1 | Thale cress | vacuole | 51.12 | 40.03 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:819062 |
| ProteinID:AAC27456.1 | ProteinID:AAM14965.1 | ProteinID:AEC10436.1 | ArrayExpress:AT2G44540 | EnsemblPlantsGene:AT2G44540 | RefSeq:AT2G44540 |
| TAIR:AT2G44540 | RefSeq:AT2G44540-TAIR-G | EnsemblPlants:AT2G44540.1 | TAIR:AT2G44540.1 | Unigene:At.12528 | Symbol:AtGH9B9 |
| GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 |
| InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 | RefSeq:NP_181982.1 | UniProt:O64889 | PFAM:PF00759 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00592 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF12 |
| SUPFAM:SSF48208 | SignalP:SignalP-noTM | UniParc:UPI00000A3C6D | SEG:seg | : | : |
Description
AtGH9B9Endoglucanase 12 [Source:UniProtKB/Swiss-Prot;Acc:O64889]
Coordinates
chr2:-:18386219..18388110
Molecular Weight (calculated)
53424.3 Da
IEP (calculated)
8.709
GRAVY (calculated)
-0.278
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSKNGSSQ CLWTSICIVV LVMSMARGAV STNYAEALQK SLLYFEAQRS GKLPPNQKVT WRGDSALKDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMGS ELRAHHEQGN SLRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPFDK
201: AYANILIGHA KDLFAFAKAH PGLYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LNYLTQASGT GGPRSVFAWD DKFVGAQVLM AKLALERKVG
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTTAS FVLSAYSKYL TKAKASIQCP KGALQASDLL QIARSQVDYI LGSNPQKMSY
401: MVGVGTNYPK KPHHRAASIV SIRKDKTPVT CSGGYDKWYN NPAPNPNVLM GALVGGPNEN DVYGDERSNF QQAEPATVTV APFVGVLAAV F
101: LAWSNIEMGS ELRAHHEQGN SLRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPFDK
201: AYANILIGHA KDLFAFAKAH PGLYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LNYLTQASGT GGPRSVFAWD DKFVGAQVLM AKLALERKVG
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTTAS FVLSAYSKYL TKAKASIQCP KGALQASDLL QIARSQVDYI LGSNPQKMSY
401: MVGVGTNYPK KPHHRAASIV SIRKDKTPVT CSGGYDKWYN NPAPNPNVLM GALVGGPNEN DVYGDERSNF QQAEPATVTV APFVGVLAAV F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.