Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- plastid 3
- vacuole 4
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97262 | Canola | vacuole | 91.09 | 91.44 |
| Bra018559.1-P | Field mustard | extracellular, vacuole | 90.89 | 91.25 |
| CDY52780 | Canola | extracellular, vacuole | 91.28 | 90.93 |
| CDY22043 | Canola | extracellular, vacuole | 90.89 | 90.54 |
| Bra036281.1-P | Field mustard | extracellular, vacuole | 90.7 | 90.35 |
| CDY01915 | Canola | cytosol | 55.81 | 79.34 |
| KRH68213 | Soybean | nucleus | 76.74 | 79.2 |
| KRH31855 | Soybean | nucleus | 77.33 | 79.01 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 76.36 | 78.64 |
| KRH69273 | Soybean | extracellular, vacuole | 76.94 | 78.3 |
| VIT_07s0005g00740.t01 | Wine grape | plastid | 77.13 | 77.89 |
| KRG96467 | Soybean | extracellular, vacuole | 62.79 | 77.88 |
| PGSC0003DMT400081314 | Potato | extracellular | 73.26 | 75.6 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 73.26 | 74.7 |
| Solyc09g075360.2.1 | Tomato | plastid | 73.64 | 74.51 |
| Os01t0312800-01 | Rice | extracellular | 68.41 | 70.74 |
| TraesCS1D01G365100.1 | Wheat | extracellular, vacuole | 67.25 | 69.68 |
| TraesCS1B01G377100.1 | Wheat | extracellular, vacuole | 67.05 | 69.62 |
| EES00659 | Sorghum | vacuole | 66.86 | 68.86 |
| Zm00001d009097_P001 | Maize | extracellular | 68.02 | 67.5 |
| HORVU1Hr1G079980.3 | Barley | extracellular, vacuole | 67.44 | 66.41 |
| TraesCS1A01G360700.3 | Wheat | extracellular, vacuole | 67.05 | 65.65 |
| AT1G70710.1 | Thale cress | vacuole | 57.36 | 60.16 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 55.62 | 58.69 |
| AT1G22880.1 | Thale cress | extracellular | 54.07 | 57.64 |
| AT1G71380.1 | Thale cress | extracellular | 53.29 | 56.82 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 52.13 | 54.12 |
| AT4G23560.1 | Thale cress | extracellular | 47.48 | 51.15 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 48.64 | 50.91 |
| AT4G09740.1 | Thale cress | extracellular | 46.9 | 50.63 |
| AT2G44570.1 | Thale cress | extracellular | 44.96 | 47.15 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 44.77 | 47.05 |
| AT3G43860.1 | Thale cress | extracellular, vacuole | 43.99 | 46.71 |
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 43.99 | 46.33 |
| AT2G44540.1 | Thale cress | vacuole | 43.8 | 46.03 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 45.93 | 45.14 |
| AT4G11050.1 | Thale cress | vacuole | 47.67 | 39.3 |
| AT1G48930.1 | Thale cress | vacuole | 43.6 | 35.89 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:828080 |
| ProteinID:AAC28173.1 | ProteinID:AEE82151.1 | ProteinID:ANM67028.1 | ArrayExpress:AT4G02290 | EnsemblPlantsGene:AT4G02290 | RefSeq:AT4G02290 |
| TAIR:AT4G02290 | RefSeq:AT4G02290-TAIR-G | EnsemblPlants:AT4G02290.1 | TAIR:AT4G02290.1 | EMBL:AY079162 | EMBL:AY101518 |
| Unigene:At.25411 | Symbol:AtGH9B13 | ProteinID:CAB80722.1 | GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030245 | GO:GO:0071555 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | InterPro:IPR012341 |
| RefSeq:NP_001328883.1 | RefSeq:NP_192138.1 | UniProt:O81416 | PFAM:PF00759 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007103 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00592 | ScanProsite:PS00698 |
| PANTHER:PTHR22298 | PANTHER:PTHR22298:SF55 | SUPFAM:SSF48208 | TMHMM:TMhelix | UniParc:UPI00000A7F88 | SEG:seg |
Description
AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
Coordinates
chr4:-:1002338..1005305
Molecular Weight (calculated)
57304.2 Da
IEP (calculated)
9.250
GRAVY (calculated)
-0.183
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.