Factsheet for AT4G39010.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 5
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011881.1-P	Field mustard	cytosol	89.13	93.26
CDY42599	Canola	cytosol	88.73	92.84
CDY41955	Canola	extracellular, vacuole	92.15	92.53
KRH60771	Soybean	extracellular, vacuole	70.22	71.08
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	70.42	70.71
KRH51463	Soybean	extracellular	70.02	70.45
KRH29353	Soybean	extracellular, vacuole	70.02	69.32
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	68.81	69.09
Solyc01g110340.2.1	Tomato	extracellular, vacuole	68.21	68.35
GSMUA_Achr2P03400_001	Banana	extracellular	62.58	62.32
GSMUA_Achr1P07760_001	Banana	vacuole	62.37	61.88
AT4G39000.1	Thale cress	extracellular, vacuole	60.56	61.05
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	53.92	60.91
TraesCS5A01G317400.1	Wheat	plastid	61.77	60.2
TraesCS5B01G318000.1	Wheat	vacuole	61.97	60.04
HORVU5Hr1G081200.5	Barley	vacuole	61.77	59.61
Os09t0530200-01	Rice	mitochondrion	59.96	57.86
AT1G70710.1	Thale cress	vacuole	57.14	57.72
AT1G23210.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	56.14	57.06
TraesCS5D01G323700.2	Wheat	vacuole	62.17	56.18
Zm00001d021280_P004	Maize	vacuole	61.97	56.0
OQU89810	Sorghum	extracellular, plastid, vacuole	62.78	55.81
AT1G02800.1	Thale cress	extracellular, vacuole	55.53	55.09
AT1G22880.1	Thale cress	extracellular	52.31	53.72
AT4G02290.1	Thale cress	plastid	54.12	52.13
AT1G71380.1	Thale cress	extracellular	50.1	51.45
AT4G23560.1	Thale cress	extracellular	47.48	49.27
AT4G09740.1	Thale cress	extracellular	47.08	48.95
AT2G44570.1	Thale cress	extracellular	44.87	45.33
AT2G44540.1	Thale cress	vacuole	44.67	45.21
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	44.47	45.1
AT2G44560.1	Thale cress	extracellular, vacuole	44.27	44.81
AT3G43860.1	Thale cress	extracellular, vacuole	41.25	42.18
AT2G32990.1	Thale cress	extracellular, vacuole	44.27	41.9
AT4G11050.1	Thale cress	vacuole	45.47	36.1
AT1G48930.1	Thale cress	vacuole	43.46	34.45

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EntrezGene:830056
ProteinID:AEE87007.1	ArrayExpress:AT4G39010	EnsemblPlantsGene:AT4G39010	RefSeq:AT4G39010	TAIR:AT4G39010	RefSeq:AT4G39010-TAIR-G
EnsemblPlants:AT4G39010.1	TAIR:AT4G39010.1	EMBL:AY059825	Unigene:At.26609	Symbol:AtGH9B18	EMBL:BT002204
ProteinID:CAB38821.1	ProteinID:CAB80564.1	GO:GO:0000003	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009791	GO:GO:0009828	GO:GO:0009987
GO:GO:0010047	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0071555
GO:GO:1990059	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	RefSeq:NP_568050.1
PFAM:PF00759	PO:PO:0000037	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007098	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020094	PO:PO:0025022	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29
UniProt:Q93YQ7	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00000A445C	SEG:seg	:

Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]

Coordinates

chr4:-:18175900..18179266

Molecular Weight (calculated)

55497.9 Da

IEP (calculated)

4.828

GRAVY (calculated)

-0.324

Length

497 amino acids

Sequence
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.