Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- vacuole 4
- extracellular 5
- plasma membrane 4
- golgi 3
- endoplasmic reticulum 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034983.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 80.66 | 88.69 |
| CDY12319 | Canola | cytosol, extracellular, vacuole | 88.48 | 88.48 |
| CDX87948 | Canola | extracellular, vacuole | 88.48 | 88.48 |
| Bra019455.1-P | Field mustard | golgi, vacuole | 87.04 | 87.04 |
| CDY30943 | Canola | golgi, vacuole | 86.83 | 86.83 |
| CDY21221 | Canola | golgi, vacuole | 86.83 | 86.83 |
| VIT_04s0008g02020.t01 | Wine grape | vacuole | 72.22 | 72.22 |
| KRH52260 | Soybean | extracellular, vacuole | 67.9 | 68.32 |
| KRH52262 | Soybean | extracellular, vacuole | 67.7 | 68.12 |
| VIT_04s0008g02010.t01 | Wine grape | vacuole | 66.46 | 66.05 |
| Solyc06g066120.2.1 | Tomato | extracellular, vacuole | 65.23 | 65.23 |
| PGSC0003DMT400052749 | Potato | extracellular, vacuole | 64.61 | 64.61 |
| Os02t0778600-01 | Rice | plasma membrane | 62.76 | 60.88 |
| EES05890 | Sorghum | vacuole | 61.52 | 60.16 |
| GSMUA_Achr6P22750_001 | Banana | vacuole | 63.79 | 59.62 |
| TraesCS6B01G368000.1 | Wheat | extracellular | 60.91 | 59.32 |
| TraesCS6D01G318100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 61.32 | 58.66 |
| TraesCS6A01G337300.1 | Wheat | mitochondrion | 61.11 | 58.58 |
| HORVU6Hr1G081500.1 | Barley | plastid | 61.11 | 57.01 |
| AT4G09740.1 | Thale cress | extracellular | 45.47 | 46.23 |
| AT4G23560.1 | Thale cress | extracellular | 45.47 | 46.14 |
| AT1G71380.1 | Thale cress | extracellular | 45.68 | 45.87 |
| AT1G22880.1 | Thale cress | extracellular | 45.27 | 45.45 |
| AT1G02800.1 | Thale cress | extracellular, vacuole | 46.5 | 45.11 |
| AT2G44550.1 | Thale cress | extracellular, plasma membrane, vacuole | 44.65 | 44.29 |
| AT4G02290.1 | Thale cress | plastid | 46.71 | 43.99 |
| AT2G44560.1 | Thale cress | extracellular, vacuole | 44.44 | 43.99 |
| AT1G70710.1 | Thale cress | vacuole | 44.24 | 43.7 |
| AT2G44570.1 | Thale cress | extracellular | 44.03 | 43.5 |
| AT2G44540.1 | Thale cress | vacuole | 43.83 | 43.38 |
| AT1G23210.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 43.62 | 43.35 |
| AT2G32990.1 | Thale cress | extracellular, vacuole | 45.27 | 41.9 |
| AT4G39010.1 | Thale cress | extracellular, vacuole | 42.18 | 41.25 |
| AT4G39000.1 | Thale cress | extracellular, vacuole | 40.74 | 40.16 |
| AT4G11050.1 | Thale cress | vacuole | 44.86 | 34.82 |
| AT1G48930.1 | Thale cress | vacuole | 42.39 | 32.85 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:823499 |
| ProteinID:AEE77836.1 | ProteinID:ANM65868.1 | ArrayExpress:AT3G43860 | EnsemblPlantsGene:AT3G43860 | RefSeq:AT3G43860 | TAIR:AT3G43860 |
| RefSeq:AT3G43860-TAIR-G | EnsemblPlants:AT3G43860.1 | TAIR:AT3G43860.1 | EMBL:AY072099 | Symbol:AtGH9A4 | ProteinID:CAB83158.1 |
| GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 |
| GO:GO:0071555 | InterPro:Glyco_hydro_9 | InterPro:IPR012341 | RefSeq:NP_001327805.1 | RefSeq:NP_189972.2 | PFAM:PF00759 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF31 | UniProt:Q8VYG3 | SUPFAM:SSF48208 |
| TMHMM:TMhelix | UniParc:UPI00000A1B24 | SEG:seg | : | : | : |
Description
AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
Coordinates
chr3:+:15706954..15709989
Molecular Weight (calculated)
54122.6 Da
IEP (calculated)
9.192
GRAVY (calculated)
-0.258
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.