Factsheet for Bra019455.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 1
nucleus 1
extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 4
vacuole 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30943	Canola	golgi, vacuole	99.79	99.79
CDY21221	Canola	golgi, vacuole	99.79	99.79
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	83.33	91.63
AT3G43860.1	Thale cress	extracellular, vacuole	87.04	87.04
VIT_04s0008g02020.t01	Wine grape	vacuole	70.16	70.16
KRH52262	Soybean	extracellular, vacuole	67.7	68.12
KRH52260	Soybean	extracellular, vacuole	67.28	67.7
Solyc06g066120.2.1	Tomato	extracellular, vacuole	65.84	65.84
VIT_04s0008g02010.t01	Wine grape	vacuole	66.05	65.64
PGSC0003DMT400052749	Potato	extracellular, vacuole	64.81	64.81
Os02t0778600-01	Rice	plasma membrane	62.76	60.88
EES05890	Sorghum	vacuole	61.32	59.96
GSMUA_Achr6P22750_001	Banana	vacuole	63.99	59.81
TraesCS6B01G368000.1	Wheat	extracellular	60.91	59.32
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	61.52	58.86
TraesCS6A01G337300.1	Wheat	mitochondrion	61.32	58.78
HORVU6Hr1G081500.1	Barley	plastid	61.32	57.2
Bra019296.1-P	Field mustard	extracellular, vacuole	47.74	48.33
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	46.71	47.0
Bra004846.1-P	Field mustard	nucleus	45.27	46.81
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	45.88	46.07
Bra007982.1-P	Field mustard	extracellular	45.68	45.87
Bra018559.1-P	Field mustard	extracellular, vacuole	48.35	45.72
Bra004845.1-P	Field mustard	extracellular	45.88	45.6
Bra013709.1-P	Field mustard	extracellular	44.86	45.42
Bra004844.1-P	Field mustard	extracellular, vacuole	45.68	45.4
Bra032584.1-P	Field mustard	extracellular, vacuole	48.15	45.26
Bra036281.1-P	Field mustard	extracellular, vacuole	48.15	45.17
Bra011881.1-P	Field mustard	cytosol	43.83	44.84
Bra007983.1-P	Field mustard	extracellular	44.44	44.72
Bra024571.1-P	Field mustard	extracellular	45.06	44.33
Bra003946.1-P	Field mustard	extracellular	44.44	44.26
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	42.8	43.7
Bra016192.1-P	Field mustard	extracellular, vacuole	44.65	43.49
Bra033592.1-P	Field mustard	extracellular	43.21	42.68
Bra011882.1-P	Field mustard	extracellular	42.59	42.07
Bra005536.1-P	Field mustard	vacuole	44.65	41.57
Bra021821.1-P	Field mustard	vacuole	42.59	40.67
Bra033591.1-P	Field mustard	extracellular, vacuole	40.95	40.61
Bra027735.1-P	Field mustard	extracellular, vacuole	46.3	36.29
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.3	36.23
Bra032270.1-P	Field mustard	extracellular	42.18	33.66
Bra018765.1-P	Field mustard	vacuole	42.8	33.33

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra019455
EnsemblPlants:Bra019455.1	EnsemblPlants:Bra019455.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:M4DSG2	PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF31
SUPFAM:SSF48208	TMHMM:TMhelix	UniParc:UPI000253F15B	SEG:seg	:	:

Description

AT3G43860 (E=1e-237) AtGH9A4 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA06:-:13488215..13490624

Molecular Weight (calculated)

53826.1 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.231

Length

486 amino acids

Sequence
(BLAST)

001: MGSPGDKARR NVVIRAILLG LISIVCVNGT IINYKEALTK SLIFLEAQRS GKLPPNNRVP WRGDSALDDG KLANVDLAGG YYDAGDNVKY GLPMAFTITT
101: LAWSTINYEK ELHAAGELEN TRAAIRWGTD YLLKCASREN RLYVQVGDPN ADHKCWARPE NMQTPRTVLE ISDKDPGTEI AAETAAALAA SSIVFRHIDH
201: MYSRQLLNKA KLLFKLAKSH KGTYDGACPF YCSNSGYNDE LLWAATWLYK ATRIEVYLSY LKFEAISAYV AEFSWDLKYA GAQILILEMI FEGAKGLDLY
301: KQQADSFICS NIPESQYHQV FTTPGGLIHL RDGANTQYVT ATAFLFSAYA DILQKHNQKI TCGSKQFDST NLMAFAKKQI DYILGHNPKG RSYMVGFGPN
401: PPMQAHHRGA SVPVAEGNEP LSCPMSFVKW FNKNQPNANE LTGAIVGGPD RQDNFQDFRW TSAYTEPCTY INSIAVGVLA KLAATA

Best Arabidopsis Sequence Match ( AT3G43860.1 )
(BLAST)

001: MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
101: TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
201: HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
301: YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
401: NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA

Arabidopsis Description

AtGH9A4Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.