Factsheet for Bra024571.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21424	Canola	extracellular	100.0	100.0
AT1G23210.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	90.49	91.41
Bra003946.1-P	Field mustard	extracellular	83.0	84.02
Bra016192.1-P	Field mustard	extracellular, vacuole	84.21	83.37
KRH41678	Soybean	nucleus	76.11	76.58
PGSC0003DMT400023082	Potato	extracellular, vacuole	75.3	76.07
Solyc09g010210.2.1	Tomato	plastid	75.3	76.07
KRH60381	Soybean	nucleus	75.71	76.02
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	72.67	71.94
TraesCS6A01G295300.1	Wheat	extracellular	71.26	70.97
TraesCS6B01G325400.1	Wheat	extracellular	71.26	70.97
HORVU6Hr1G073570.3	Barley	extracellular	71.26	70.83
TraesCS7D01G207600.1	Wheat	extracellular	71.46	70.74
HORVU7Hr1G041610.1	Barley	vacuole	71.86	70.72
Os02t0733300-01	Rice	extracellular	72.47	70.47
TraesCS7A01G204500.1	Wheat	extracellular	71.46	70.18
TraesCS6D01G275900.1	Wheat	extracellular	70.65	70.08
Os06t0256900-01	Rice	endoplasmic reticulum, extracellular, vacuole	70.45	70.02
EES07307	Sorghum	vacuole	70.85	69.44
Zm00001d017949_P001	Maize	extracellular	67.21	68.45
Zm00001d037338_P001	Maize	vacuole	68.83	68.0
TraesCS7B01G111700.1	Wheat	extracellular	71.66	67.05
EER89549	Sorghum	mitochondrion	69.64	61.21
Bra011881.1-P	Field mustard	cytosol	56.68	58.95
Bra018559.1-P	Field mustard	extracellular, vacuole	60.32	57.98
Bra036281.1-P	Field mustard	extracellular, vacuole	60.12	57.34
Bra032584.1-P	Field mustard	extracellular, vacuole	58.5	55.9
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	54.05	55.28
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	52.63	53.72
Bra007983.1-P	Field mustard	extracellular	51.42	52.59
Bra007982.1-P	Field mustard	extracellular	51.42	52.48
Bra033592.1-P	Field mustard	extracellular	51.82	52.03
Bra033591.1-P	Field mustard	extracellular, vacuole	51.42	51.84
Bra011882.1-P	Field mustard	extracellular	51.42	51.63
Bra019296.1-P	Field mustard	extracellular, vacuole	46.36	47.71
Bra013709.1-P	Field mustard	extracellular	45.75	47.08
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.3	46.15
Bra004846.1-P	Field mustard	nucleus	43.32	45.53
Bra019455.1-P	Field mustard	golgi, vacuole	44.33	45.06
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	42.11	43.7
Bra005536.1-P	Field mustard	vacuole	46.15	43.68
Bra004845.1-P	Field mustard	extracellular	43.12	43.56
Bra004844.1-P	Field mustard	extracellular, vacuole	42.91	43.35
Bra021821.1-P	Field mustard	vacuole	44.33	43.03
Bra027735.1-P	Field mustard	extracellular, vacuole	50.0	39.84
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.0	39.77
Bra032270.1-P	Field mustard	extracellular	44.33	35.96
Bra018765.1-P	Field mustard	vacuole	44.74	35.42

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra024571
EnsemblPlants:Bra024571.1	EnsemblPlants:Bra024571.1-P	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M4E716	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF28	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0002542A01	SEG:seg	:

Description

AT1G23210 (E=1e-246) AtGH9B6 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA09:-:24324373..24326505

Molecular Weight (calculated)

54522.4 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.166

Length

494 amino acids

Sequence
(BLAST)

001: MAGKSLTLSG LAPAAAIILA LLLLSPEICT GHDYRDALKK SILFFEGQRS GKLPPDQRLK WRRDSGLRDG SSAGVDLTGG YYDAGDNVKF GFPMAFTTTM
101: MSWSVIDFGK TMGPELENAV KAIKWGTDYL LKATAIPSVV FVQVGDAYSD HNCWERPEDM DTLRTVYKVD KDHPGSEVAG ETAAALAAAS IVFAKRDPAY
201: SKRLLDRAAR VFAFANKYRG AYSDSLRQAV CPFYCNFNGY EDELLWGAAW LHKASKKRVY RLYIVKNKEI LRAGDTIHEF GWDNKHAGIN VLISKMVLMG
301: KADYFQSFKQ NADEFICSLL PGISHPQVEY SLGGLLVKSG GSNMQHVTSL SFLLLTYSNY LSHAKKVVPC GQFTASPALL RQVAKRQVDY ILGDNPMKMS
401: YMVGYGSRFP QRIHHRGSSV PSVVDHPARI GCKEGSRYFL SPNPNPNLLI GAVVGGPNVT DDFPDSRPYF QLTEPTTYIN APLLGLLSYF SAHA

Best Arabidopsis Sequence Match ( AT1G23210.1 )
(BLAST)

001: MAGKSFMTPA IMLAMLLLIS PETYAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS ALRDGSSAGV DLTGGYYDAG DNVKFGFPMA FTTTMMSWSV
101: IDFGKTMGPE LENAVKAIKW GTDYLMKATQ IPDVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDKDHSG SEVAGETAAA LAAASIVFEK RDPVYSKMLL
201: DRATRVFAFA QKYRGAYSDS LYQAVCPFYC DFNGYEDELL WGAAWLHKAS KKRVYREFIV KNQVILRAGD TIHEFGWDNK HAGINVLVSK MVLMGKAEYF
301: QSFKQNADEF ICSLLPGISH PQVQYSQGGL LVKSGGSNMQ HVTSLSFLLL TYSNYLSHAN KVVPCGEFTA SPALLRQVAK RQVDYILGDN PMKMSYMVGY
401: GSRFPQKIHH RGSSVPSVVD HPDRIGCKDG SRYFFSNNPN PNLLIGAVVG GPNITDDFPD SRPYFQLTEP TTYINAPLLG LLGYFSAHY

Arabidopsis Description

AtGH9B6Endoglucanase 4 [Source:UniProtKB/Swiss-Prot;Acc:O49296]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.