Factsheet for TraesCS6D01G275900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G325400.1	Wheat	extracellular	98.39	98.79
HORVU6Hr1G073570.3	Barley	extracellular	97.99	98.19
TraesCS6A01G295300.1	Wheat	extracellular	97.79	98.19
Os02t0733300-01	Rice	extracellular	90.36	88.58
EES07307	Sorghum	vacuole	87.75	86.71
Zm00001d017949_P001	Maize	extracellular	84.14	86.39
TraesCS7D01G207600.1	Wheat	extracellular	81.12	80.96
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	76.71	76.55
Bra003946.1-P	Field mustard	extracellular	72.29	73.77
CDX68334	Canola	endoplasmic reticulum	72.09	73.57
CDY23486	Canola	extracellular	71.89	73.36
KRH41678	Soybean	nucleus	71.69	72.71
KRH60381	Soybean	nucleus	71.49	72.36
CDX96271	Canola	extracellular, vacuole	72.49	72.34
Bra016192.1-P	Field mustard	extracellular, vacuole	72.49	72.34
CDY11552	Canola	endoplasmic reticulum, extracellular	71.89	71.74
PGSC0003DMT400023082	Potato	extracellular, vacuole	70.28	71.57
AT1G70710.1	Thale cress	vacuole	70.48	71.34
Bra024571.1-P	Field mustard	extracellular	70.08	70.65
CDY21424	Canola	extracellular	70.08	70.65
AT1G23210.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	69.28	70.55
CDY04737	Canola	extracellular, vacuole	69.28	70.12
Solyc09g010210.2.1	Tomato	plastid	68.67	69.94
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	58.23	58.23
TraesCS7D01G314400.1	Wheat	vacuole	54.82	55.26
TraesCS5D01G323700.2	Wheat	vacuole	59.44	53.82
TraesCS6D01G089200.1	Wheat	golgi	46.39	53.47
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.61	52.51
TraesCS2D01G308500.1	Wheat	golgi	50.6	50.6
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	43.17	46.34
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	44.38	45.1
TraesCS1D01G090100.1	Wheat	extracellular	45.18	44.73
TraesCS1D01G075100.1	Wheat	vacuole	43.98	44.69
TraesCS1D01G074800.1	Wheat	vacuole	40.16	43.1
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.18	42.72
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	45.18	42.29
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.78	42.16
TraesCS5D01G208900.1	Wheat	vacuole	45.18	41.98
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.37	41.54
TraesCS6D01G291800.1	Wheat	vacuole	45.18	41.36
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	47.19	37.9
TraesCS2D01G557500.1	Wheat	extracellular	46.79	37.76
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	46.59	35.53

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592
ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF99	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6D01G275900
EnsemblPlants:TraesCS6D01G275900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:384438829..384441308

Molecular Weight (calculated)

54429.4 Da

IEP (calculated)

8.268

GRAVY (calculated)

-0.252

Length

498 amino acids

Sequence
(BLAST)

001: MGLSSVLLLA LLLLPAVASA GHHDYGDALH KSILFFEGQR SGRLPPDQRL RWRRDSGLHD GAAAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG
101: RSFGPHKEEA RKAVRWATDY FMKATAKRNT VYVQVGDASK DHSCWERPED MDTPRTVYKV DPSHPGSDVA AETAAALAAG SIVFRDADPV YSQRLLDRAM
201: AVFKFADRYR GAYSSSLHAA VCPCYCDFDG YQDELLWAAA WLHKASRRRE YRQYIKRNEV VLGASDSINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR
301: ANANNFMCTL LPGISDHPQI QYSPGGLLFK VGGSNMQHVT SLSFLILAYS NYLSHAGAHV SCGGGGGRSA PPTKLRQVAK RQVDYILGDN PLRMSYMVGY
401: GPRFPRRIHH RGSSIPSVAA HPARIGCKAG AAYYASAAPN PNLLVGAVVG GPSDATDAFP DARAVFQQSE PTTYINAPLM GLLAYFSAHP NPAEWADD

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.