Factsheet for TraesCS5D01G208900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G202600.1	Wheat	vacuole	95.71	95.71
TraesCS5B01G201100.1	Wheat	vacuole	96.08	95.55
HORVU5Hr1G060140.1	Barley	vacuole	83.96	77.85
Os09t0394300-01	Rice	extracellular, vacuole	63.81	77.55
EER98860	Sorghum	golgi, mitochondrion, vacuole	78.17	77.31
Zm00001d020371_P001	Maize	mitochondrion	77.24	76.81
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	64.93	67.57
PGSC0003DMT400001781	Potato	extracellular, vacuole	60.82	64.81
Solyc07g049300.2.1	Tomato	extracellular, vacuole	60.63	64.61
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	63.81	64.29
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	61.75	63.53
CDY17123	Canola	vacuole	61.19	62.84
Bra005536.1-P	Field mustard	vacuole	61.01	62.64
CDY19428	Canola	vacuole	61.01	62.64
CDY19174	Canola	vacuole	61.19	62.24
AT2G32990.1	Thale cress	extracellular, vacuole	60.82	62.1
TraesCS6D01G291800.1	Wheat	vacuole	62.87	61.95
GSMUA_Achr7P02160_001	Banana	vacuole	58.58	61.57
Bra021821.1-P	Field mustard	vacuole	58.4	61.49
CDY23776	Canola	vacuole	60.07	61.22
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	59.14	59.92
KRH73374	Soybean	vacuole	58.58	59.92
KRH14764	Soybean	cytosol, nucleus, vacuole	44.96	59.36
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	56.34	59.22
TraesCS1D01G075100.1	Wheat	vacuole	45.52	49.8
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	45.15	49.39
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	42.72	49.35
TraesCS1D01G074800.1	Wheat	vacuole	41.23	47.63
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	52.8	45.65
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.16	45.29
TraesCS6D01G275900.1	Wheat	extracellular	41.98	45.18
TraesCS7D01G314400.1	Wheat	vacuole	41.6	45.14
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	41.04	44.18
TraesCS2D01G557500.1	Wheat	extracellular	50.37	43.76
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	53.17	43.64
TraesCS7D01G207600.1	Wheat	extracellular	40.49	43.49
TraesCS6D01G089200.1	Wheat	golgi	34.7	43.06
TraesCS1D01G090100.1	Wheat	extracellular	39.93	42.54
TraesCS2D01G308500.1	Wheat	golgi	38.99	41.97
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.13	39.17
TraesCS5D01G323700.2	Wheat	vacuole	39.93	38.91

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF43	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G208900	EnsemblPlants:TraesCS5D01G208900.1	SEG:seg

Description

No Description!

Coordinates

chr5D:-:315476372..315485627

Molecular Weight (calculated)

59388.2 Da

IEP (calculated)

7.920

GRAVY (calculated)

-0.273

Length

536 amino acids

Sequence
(BLAST)

001: MSRGRVRRAA GSPVAAALVL LQAAVLALSP GCDAAAVTTD AEPDYREALS KSLLYFEAQR SGRLPYNQRV RWRGHSGITD GLQQGVDLVG GYYDAGDHVK
101: FGLPMAFTVT MLSWGAIEFG DDIAAAGEWH HTLEAIKWGT DYFIKAHTEP FVYWAEVGDG DTDHYCWQRP EDMTTSRKAY RVDKDNPGSD LVAETAAALA
201: AASIVFRGSN PHYSHILLHH GQQLFEFGDR YRGNYDISIA EVRGFYASVS GYRDELLWAA FWLHRATGKE EFLRYAVDKA DCFGGVGWAM TEFSWDVKYA
301: GLQVLASKLL LDGDPQGERH RVVLERYRAK AEHYLCACLR LNNGSNVDRS PGGMLYVRQW NNLQYASSAA FLLTVYSRYL AGAGARLRCP DAPAVPPSEL
401: LALARSQAEY ILGRNPLRLS YMVGYGPRFP AQVHHRAASI VSHKANNRFI GCMQGFDHWY VRKRPNPNVL TGAIVGGPNC RDEFRDDRTN YVQTEACTYN
501: TAPMVAVFAR LHNLSATAAE EGCRPGTALG LSAKCK

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.