Factsheet for TraesCS1D01G075100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	96.33	96.33
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	88.98	93.97
HORVU1Hr1G015550.1	Barley	vacuole	92.24	92.24
TraesCS1D01G074800.1	Wheat	vacuole	86.53	91.38
KXG21209	Sorghum	cytosol	53.47	67.35
Zm00001d035442_P001	Maize	extracellular, vacuole	54.69	64.27
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	67.14	64.26
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	53.47	58.35
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	55.71	56.88
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	55.92	56.73
Bra004846.1-P	Field mustard	nucleus	54.08	56.38
PGSC0003DMT400069884	Potato	extracellular, vacuole	55.1	56.37
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	55.51	55.51
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	53.88	55.46
AT2G44540.1	Thale cress	vacuole	55.51	55.4
CDX83426	Canola	extracellular, plastid, vacuole	53.88	55.11
AT2G44560.1	Thale cress	extracellular, vacuole	54.49	54.38
AT2G44570.1	Thale cress	extracellular	54.49	54.27
CDX74668	Canola	extracellular	54.49	54.16
Solyc05g052530.1.1	Tomato	extracellular	53.67	54.12
CDY47674	Canola	extracellular, vacuole	53.67	53.35
CDX74666	Canola	vacuole	52.65	52.76
KRG89135	Soybean	extracellular	52.04	52.58
Bra004845.1-P	Field mustard	extracellular	52.24	52.35
CDX74667	Canola	extracellular, vacuole	46.12	52.19
CDY47675	Canola	vacuole	52.04	52.15
CDX95605	Canola	extracellular, vacuole	53.06	52.1
CDX74664	Canola	extracellular, vacuole	51.22	51.33
Bra004844.1-P	Field mustard	extracellular, vacuole	50.61	50.72
TraesCS7D01G314400.1	Wheat	vacuole	48.78	48.38
TraesCS5D01G176800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.57	47.7
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	47.76	46.99
TraesCS7D01G146000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.98	46.6
TraesCS6D01G112100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.39	45.75
TraesCS5D01G208900.1	Wheat	vacuole	49.8	45.52
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	48.98	45.11
TraesCS6D01G089200.1	Wheat	golgi	39.39	44.68
TraesCS1D01G090100.1	Wheat	extracellular	45.71	44.53
TraesCS7D01G207600.1	Wheat	extracellular	45.31	44.49
TraesCS6D01G291800.1	Wheat	vacuole	49.18	44.3
TraesCS6D01G275900.1	Wheat	extracellular	44.69	43.98
TraesCS2D01G308500.1	Wheat	golgi	44.49	43.78
TraesCS5D01G323700.2	Wheat	vacuole	46.73	41.64
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	51.43	40.65
TraesCS6D01G318100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.43	39.96
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	52.04	39.05
TraesCS2D01G557500.1	Wheat	extracellular	48.57	38.57

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PFscan:PS51257
PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G075100
EnsemblPlants:TraesCS1D01G075100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:56873122..56875238

Molecular Weight (calculated)

52803.5 Da

IEP (calculated)

8.792

GRAVY (calculated)

-0.236

Length

490 amino acids

Sequence
(BLAST)

001: MVGSARVLLV AAVVGFFATM ACGAAQRDYA AALTKSLLYF EAQRSGRLPT TQRVQWRGNS ALKDGADHGV DLTGGYYDSG DNVKFGFPMA FTVTMLSWSV
101: VEHRGRLAAA GELGHALQAV RWGADYLAKA HARPDVLYVN VGDGDSDHAC WERPEDMDTP RRSYMVNATN PGSDVAAETA AALAAASVAF TGPRGDPRYA
201: STLLKHAKQL FQFAKNHRGL YQNSIPSARS FYSSSGDEDE LLWAAVWLYI ATGHQEYKAY IAGANNVGGV PQSLGWDDKF VGAQALVAKL ILQGKLPNNG
301: RHAEMRSNVE SFLCNVLQHG DGRSGRLTPG GMLYLQPWSN LQDVTTAMFV LVTHADQLAA ARASLQCGGV RLPPAQLVSF ARSQVDYILG KNPMKMSYMV
401: GVGKRYPLQP HHRGASLPSI KNNPGKISCG KGADYFHRSA PNLNVIDGAI VGGPDNNDHY DDSRGNYQQG EPSTYTVAPI VGVLARLLPN

Best Arabidopsis Sequence Match ( AT2G44540.1 )
(BLAST)

001: MSQSKNGSSQ CLWTSICIVV LVMSMARGAV STNYAEALQK SLLYFEAQRS GKLPPNQKVT WRGDSALKDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMGS ELRAHHEQGN SLRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPFDK
201: AYANILIGHA KDLFAFAKAH PGLYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LNYLTQASGT GGPRSVFAWD DKFVGAQVLM AKLALERKVG
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTTAS FVLSAYSKYL TKAKASIQCP KGALQASDLL QIARSQVDYI LGSNPQKMSY
401: MVGVGTNYPK KPHHRAASIV SIRKDKTPVT CSGGYDKWYN NPAPNPNVLM GALVGGPNEN DVYGDERSNF QQAEPATVTV APFVGVLAAV F

Arabidopsis Description

AtGH9B9Endoglucanase 12 [Source:UniProtKB/Swiss-Prot;Acc:O64889]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.