Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 2
- extracellular 2
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G144600.1 | Wheat | extracellular, vacuole | 90.66 | 93.97 |
| HORVU3Hr1G029470.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 85.45 | 89.57 |
| Os01t0220100-01 | Rice | extracellular, vacuole | 68.45 | 69.84 |
| Os01t0219600-00 | Rice | mitochondrion | 67.23 | 68.59 |
| Zm00001d008952_P001 | Maize | extracellular | 67.69 | 68.53 |
| EES00050 | Sorghum | extracellular, mitochondrion, plastid, vacuole | 68.61 | 68.5 |
| TraesCS1D01G397400.1 | Wheat | extracellular, vacuole | 62.63 | 65.97 |
| GSMUA_Achr4P08520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 54.52 | 60.85 |
| CDY47849 | Canola | extracellular, vacuole | 57.73 | 60.81 |
| CDY34422 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.58 | 60.65 |
| Bra027699.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 57.58 | 60.55 |
| CDY46529 | Canola | extracellular, vacuole | 57.43 | 60.39 |
| Bra027735.1-P | Field mustard | extracellular, vacuole | 57.27 | 60.32 |
| PGSC0003DMT400032028 | Potato | endoplasmic reticulum, extracellular, vacuole | 57.43 | 60.0 |
| Solyc08g082250.2.1 | Tomato | extracellular | 57.27 | 59.84 |
| VIT_02s0025g01380.t01 | Wine grape | extracellular, vacuole | 57.58 | 59.78 |
| KRH60035 | Soybean | nucleus | 56.36 | 58.97 |
| KRH41305 | Soybean | nucleus | 56.2 | 58.72 |
| PGSC0003DMT400012809 | Potato | extracellular, vacuole | 48.55 | 58.7 |
| AT4G11050.1 | Thale cress | vacuole | 55.44 | 57.83 |
| CDY05130 | Canola | extracellular, vacuole | 55.28 | 57.67 |
| CDX90780 | Canola | endoplasmic reticulum, extracellular | 55.13 | 57.51 |
| KXG31545 | Sorghum | cytosol | 47.63 | 57.17 |
| TraesCS6D01G291800.1 | Wheat | vacuole | 46.09 | 55.33 |
| TraesCS7D01G146000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.49 | 55.15 |
| TraesCS7D01G201000.1 | Wheat | extracellular, vacuole | 44.87 | 55.08 |
| TraesCS5D01G208900.1 | Wheat | vacuole | 43.64 | 53.17 |
| TraesCS6D01G112100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.03 | 53.12 |
| CDY08373 | Canola | cytosol, extracellular, mitochondrion, nucleus | 34.3 | 53.08 |
| TraesCS1D01G074700.1 | Wheat | extracellular, vacuole | 39.05 | 52.04 |
| TraesCS1D01G075100.1 | Wheat | vacuole | 39.05 | 52.04 |
| TraesCS1D01G074900.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 36.75 | 51.72 |
| Solyc12g055970.1.1 | Tomato | cytosol, nucleus | 36.14 | 51.08 |
| TraesCS1D01G074800.1 | Wheat | vacuole | 35.53 | 50.0 |
| TraesCS2D01G557500.1 | Wheat | extracellular | 45.79 | 48.46 |
| TraesCS7D01G314400.1 | Wheat | vacuole | 36.14 | 47.77 |
| TraesCS1D01G365100.1 | Wheat | extracellular, vacuole | 36.14 | 47.39 |
| TraesCS7D01G207600.1 | Wheat | extracellular | 36.14 | 47.29 |
| TraesCS5D01G176800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.68 | 46.69 |
| TraesCS6D01G275900.1 | Wheat | extracellular | 35.53 | 46.59 |
| TraesCS1D01G090100.1 | Wheat | extracellular | 35.53 | 46.12 |
| TraesCS6D01G089200.1 | Wheat | golgi | 29.71 | 44.91 |
| TraesCS6D01G318100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 34.3 | 44.09 |
| TraesCS2D01G308500.1 | Wheat | golgi | 33.38 | 43.78 |
| TraesCS5D01G323700.2 | Wheat | vacuole | 36.14 | 42.91 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | InterPro:CBM_49 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | InterPro:Glyco_hydro_9 | InterPro:IPR012341 | PFAM:PF00759 |
| PFAM:PF09478 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF46 | SUPFAM:SSF48208 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G153400 |
| EnsemblPlants:TraesCS3D01G153400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:120146409..120148946
Molecular Weight (calculated)
70624.6 Da
IEP (calculated)
8.742
GRAVY (calculated)
-0.185
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLRSRAPIQ STRQCGIPSF ASLMALNQPA IAMGLLVVLV LAAMAQVAYC AGGGTTQNYR EALAKSILFL EAQRSGVLPA SQRVGWRSNS GLQDGKANGV
101: DLTGGYYDAG DNVKFGLPMA FTVTMMSWSV LEYGGQMQAA GELGNALEAI KWGTDYFVKA HPEPSVLYGE VGDGDTDHFC WQRPEEMTTS RQAYRLDPQR
201: PGSDLAGETA AAMAAASLVF RRSNPGYANL LLQHSKQLFD FADKFRGRYD ASIPVARKYY QSVSGYSDEL LWAAAWLFQA TDDRRYLDYL ANNADAMGGT
301: GWSTAMFSWD IKYAGVQVLA AKILLQGRAG AHAAVLQRYR QKADFFVCAS LGKQGYGNVK RTPGGLLYHM QWNNLQYVTS GSFLLAAYSD SLAAARQAAV
401: WCPAGPASPA QIMAFAKSQV DYILGSNPRA TSYMVGYGFI YPLEAHHRGA SIVSFQSNPS FVACKAGYAI WYPRKGSNPN LLDGAIVGGP DENDNFVDDR
501: NNYQQTEAPT YNNAPFMGVL ARLAAGGRLD RSIPDGLDNQ TSVAPSLSAA GDQGVHASPI VIEQNATASW TEKGRTYRRY AVTVTNRSLN KTVHELFLGI
601: DKLYGPVTGL DKKRYGHVLQ GTAPSVPAGG SVTFEYAHAA PPANVWVTGY KLV
101: DLTGGYYDAG DNVKFGLPMA FTVTMMSWSV LEYGGQMQAA GELGNALEAI KWGTDYFVKA HPEPSVLYGE VGDGDTDHFC WQRPEEMTTS RQAYRLDPQR
201: PGSDLAGETA AAMAAASLVF RRSNPGYANL LLQHSKQLFD FADKFRGRYD ASIPVARKYY QSVSGYSDEL LWAAAWLFQA TDDRRYLDYL ANNADAMGGT
301: GWSTAMFSWD IKYAGVQVLA AKILLQGRAG AHAAVLQRYR QKADFFVCAS LGKQGYGNVK RTPGGLLYHM QWNNLQYVTS GSFLLAAYSD SLAAARQAAV
401: WCPAGPASPA QIMAFAKSQV DYILGSNPRA TSYMVGYGFI YPLEAHHRGA SIVSFQSNPS FVACKAGYAI WYPRKGSNPN LLDGAIVGGP DENDNFVDDR
501: NNYQQTEAPT YNNAPFMGVL ARLAAGGRLD RSIPDGLDNQ TSVAPSLSAA GDQGVHASPI VIEQNATASW TEKGRTYRRY AVTVTNRSLN KTVHELFLGI
601: DKLYGPVTGL DKKRYGHVLQ GTAPSVPAGG SVTFEYAHAA PPANVWVTGY KLV
001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
Arabidopsis Description
AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.