Factsheet for VIT_02s0025g01380.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60035	Soybean	nucleus	81.56	82.21
KRH41305	Soybean	nucleus	81.08	81.6
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	76.15	77.26
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	76.15	77.13
PGSC0003DMT400032028	Potato	endoplasmic reticulum, extracellular, vacuole	76.31	76.8
Bra027735.1-P	Field mustard	extracellular, vacuole	75.68	76.77
CDY47849	Canola	extracellular, vacuole	75.52	76.61
PGSC0003DMT400012809	Potato	extracellular, vacuole	65.66	76.48
Solyc08g082250.2.1	Tomato	extracellular	75.99	76.48
CDY46529	Canola	extracellular, vacuole	75.36	76.33
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	49.28	73.46
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	68.2	73.33
AT4G11050.1	Thale cress	vacuole	72.81	73.16
CDX90780	Canola	endoplasmic reticulum, extracellular	72.02	72.36
CDY05130	Canola	extracellular, vacuole	71.54	71.89
Solyc12g055970.1.1	Tomato	cytosol, nucleus	52.78	71.86
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	61.84	62.64
TraesCS1D01G397400.1	Wheat	extracellular, vacuole	61.69	62.58
Os05t0212300-01	Rice	extracellular, vacuole	62.32	62.32
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	61.37	62.26
Zm00001d010446_P001	Maize	vacuole	60.73	61.32
EES19222	Sorghum	vacuole	61.05	61.24
HORVU1Hr1G085830.2	Barley	vacuole	60.73	61.22
Os01t0220100-01	Rice	extracellular, vacuole	62.16	61.09
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	59.78	60.35
Os01t0219600-00	Rice	mitochondrion	61.05	60.0
Zm00001d008952_P001	Maize	extracellular	61.21	59.69
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	59.46	59.37
EES00050	Sorghum	extracellular, mitochondrion, plastid, vacuole	61.53	59.17
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	44.67	58.54
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	47.06	58.04
TraesCS3D01G153400.1	Wheat	extracellular, mitochondrion, plastid, vacuole	59.78	57.58
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	47.38	57.2
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	43.88	57.14
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	49.76	50.89
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	39.27	50.1
VIT_07s0005g00740.t01	Wine grape	plastid	40.7	50.1
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	37.52	47.68
KXG31545	Sorghum	cytosol	40.7	47.06
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	36.25	46.15
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	36.88	46.12
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	36.25	45.69
VIT_04s0008g02020.t01	Wine grape	vacuole	35.29	45.68
VIT_04s0008g02010.t01	Wine grape	vacuole	34.82	44.79

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100259874	wikigene:100259874	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	UniProt:A5BTQ3	EMBL:AM470781	ProteinID:CAN66000	ProteinID:CAN66000.1	ProteinID:CBI34476
ProteinID:CBI34476.3	InterPro:CBM_49	EMBL:FN596251	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	GO:GO:0030246
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	EntrezGene:LOC100259874	wikigene:LOC100259874
PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF46
SMART:SM01063	SUPFAM:SSF48208	SignalP:SignalP-TM	TIGR:TC57188	TMHMM:TMhelix	UniParc:UPI0001521966
ArrayExpress:VIT_02s0025g01380	EnsemblPlantsGene:VIT_02s0025g01380	EnsemblPlants:VIT_02s0025g01380.t01	unigene:Vvi.5796	RefSeq:XP_002270880	RefSeq:XP_002270880.1
SEG:seg	:	:	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:A5BTQ3]

Coordinates

chr2:+:1331381..1335909

Molecular Weight (calculated)

69019.6 Da

IEP (calculated)

8.899

GRAVY (calculated)

-0.298

Length

629 amino acids

Sequence
(BLAST)

001: MEKLLRLITM APLFLQMLLV SFPFAFAGHD YGQALTKGIL FFEAQRSGYL PSNQRVKWRA DSGLHDGKAS GVDLVGGYYD AGDNVKFGLP MAFTVTMMSW
101: SIVEYGKQMA ANGELGHAME AVKWGTDYLI KAHPHPDVLY GEVGDGNTDH FCWQRPEDMT TDRRAYKIDP SNPGSDLAGE TAAAMAAASI VFRRSNPSYA
201: NELLTHARQL FEFGDKYRGK YDSSITVAQK YYRSYSGYAD ELLWAAAWLY QATNNQYYLS YLGNNGQSLG GTGWSMTEFG WDAKYAGVQV LVAKMLMQGK
301: GGRYTSVFQQ YQQKAEFFMC SCLGKGTRNI QKTPGGLLYR QRWNNMQFVT SASFLVTVYS DYLASAGKNL NCAAGSVSPS GLISFAKSQV DYILGDNPRA
401: TSYMVGYGNN YPRQVHHRGS SIVSIKVNPS FVSCRGGYAT WFSRKGSDPN LLTGAIVGGP DAYDNFADER DNYEQTEPAT YNNAPLIGLL ARLSGGHGGY
501: NQLLPVVLPA PKEVVTQPKS APTPKVTPAP ASTSAEIAIE QKLTTSWKAK GNTYNRYSTI VTNKSAKTLK DLELTISKLY GPLWGLTKSG DSYGFPSWLK
601: ALAAGEKLEF VYIHSADPAE VSVSSYTLA

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.