Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41305 | Soybean | nucleus | 96.96 | 96.8 |
| VIT_02s0025g01380.t01 | Wine grape | extracellular, vacuole | 82.21 | 81.56 |
| CDY34422 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.33 | 79.84 |
| Bra027699.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 79.33 | 79.71 |
| CDY47849 | Canola | extracellular, vacuole | 78.85 | 79.35 |
| Bra027735.1-P | Field mustard | extracellular, vacuole | 78.53 | 79.03 |
| CDY46529 | Canola | extracellular, vacuole | 78.53 | 78.91 |
| PGSC0003DMT400032028 | Potato | endoplasmic reticulum, extracellular, vacuole | 76.76 | 76.64 |
| PGSC0003DMT400012809 | Potato | extracellular, vacuole | 66.19 | 76.48 |
| Solyc08g082250.2.1 | Tomato | extracellular | 76.28 | 76.16 |
| AT4G11050.1 | Thale cress | vacuole | 76.12 | 75.88 |
| CDY08373 | Canola | cytosol, extracellular, mitochondrion, nucleus | 51.12 | 75.59 |
| CDX90780 | Canola | endoplasmic reticulum, extracellular | 75.64 | 75.4 |
| CDY05130 | Canola | extracellular, vacuole | 75.0 | 74.76 |
| GSMUA_Achr4P08520_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 68.27 | 72.82 |
| Solyc12g055970.1.1 | Tomato | cytosol, nucleus | 52.08 | 70.35 |
| TraesCS1D01G397400.1 | Wheat | extracellular, vacuole | 61.7 | 62.1 |
| Os01t0220100-01 | Rice | extracellular, vacuole | 63.62 | 62.03 |
| TraesCS4B01G104500.1 | Wheat | extracellular, vacuole | 61.54 | 61.94 |
| TraesCS1A01G389300.1 | Wheat | extracellular, vacuole | 61.38 | 61.67 |
| Zm00001d010446_P001 | Maize | vacuole | 61.38 | 61.48 |
| EES19222 | Sorghum | vacuole | 61.38 | 61.08 |
| Os05t0212300-01 | Rice | extracellular, vacuole | 61.54 | 61.05 |
| HORVU1Hr1G085830.2 | Barley | vacuole | 60.9 | 60.9 |
| Os01t0219600-00 | Rice | mitochondrion | 62.02 | 60.47 |
| Zm00001d008952_P001 | Maize | extracellular | 62.02 | 60.0 |
| EES00050 | Sorghum | extracellular, mitochondrion, plastid, vacuole | 62.5 | 59.63 |
| HORVU3Hr1G029470.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 59.46 | 59.55 |
| TraesCS3A01G144600.1 | Wheat | extracellular, vacuole | 58.65 | 58.1 |
| KRH73794 | Soybean | vacuole | 47.6 | 57.67 |
| KRH14764 | Soybean | cytosol, nucleus, vacuole | 37.34 | 57.39 |
| KRH73374 | Soybean | vacuole | 47.92 | 57.06 |
| TraesCS3D01G153400.1 | Wheat | extracellular, mitochondrion, plastid, vacuole | 58.97 | 56.36 |
| KRH14332 | Soybean | vacuole | 47.76 | 56.02 |
| KRG89135 | Soybean | extracellular | 42.95 | 55.26 |
| KRH69273 | Soybean | extracellular, vacuole | 41.35 | 50.89 |
| KRH31855 | Soybean | nucleus | 41.03 | 50.69 |
| KRH24186 | Soybean | extracellular, vacuole | 50.96 | 50.56 |
| KRH41678 | Soybean | nucleus | 39.42 | 50.1 |
| KRH60381 | Soybean | nucleus | 39.26 | 49.8 |
| KRH29156 | Soybean | extracellular, vacuole | 50.0 | 49.76 |
| KRH68213 | Soybean | nucleus | 39.42 | 49.2 |
| KRH62487 | Soybean | extracellular, vacuole | 37.5 | 48.35 |
| KRG96467 | Soybean | extracellular, vacuole | 32.21 | 48.32 |
| KXG31545 | Sorghum | cytosol | 41.99 | 48.16 |
| KRH56424 | Soybean | extracellular, vacuole | 37.18 | 47.93 |
| KRH60771 | Soybean | extracellular, vacuole | 37.66 | 47.86 |
| KRH23799 | Soybean | extracellular, nucleus, vacuole | 31.89 | 47.84 |
| KRH51463 | Soybean | extracellular | 37.66 | 47.57 |
| KRG97785 | Soybean | extracellular | 37.34 | 46.23 |
| KRH29353 | Soybean | extracellular, vacuole | 37.18 | 46.22 |
| KRH55742 | Soybean | vacuole | 35.9 | 46.09 |
| KRH52260 | Soybean | extracellular, vacuole | 35.1 | 45.34 |
| KRH39987 | Soybean | extracellular, vacuole | 35.58 | 44.94 |
| KRH52262 | Soybean | extracellular, vacuole | 34.29 | 44.31 |
| KRH23800 | Soybean | extracellular, vacuole | 35.26 | 44.27 |
| KRH27886 | Soybean | extracellular | 36.22 | 44.23 |
Protein Annotations
| KEGG:00500+3.2.1.4 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6-hairpin_glycosidase_sf | InterPro:6hp_glycosidase-like_sf | EntrezGene:732598 |
| EMBL:ACUP02003347 | InterPro:CBM_49 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G216400 | GO:GO:0000272 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008810 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030245 |
| GO:GO:0030246 | InterPro:Glyco_hydro_9 | InterPro:Glyco_hydro_9_Asp/Glu_AS | InterPro:Glyco_hydro_9_His_AS | UniProt:I1K6A1 | InterPro:IPR012341 |
| EnsemblPlants:KRH60035 | ProteinID:KRH60035 | ProteinID:KRH60035.1 | PFAM:PF00759 | PFAM:PF09478 | ScanProsite:PS00592 |
| ScanProsite:PS00698 | PANTHER:PTHR22298 | PANTHER:PTHR22298:SF19 | MetaCyc:PWY-6788 | SMART:SM01063 | SUPFAM:SSF48208 |
| SignalP:SignalP-noTM | UniParc:UPI00023396DA | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:39673239..39678762
Molecular Weight (calculated)
68733.1 Da
IEP (calculated)
8.796
GRAVY (calculated)
-0.303
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLIRMFPL LLLLLFPTFA FAGHDYGQAL SKSLLFFEAQ RSGYLPHNQR VTWRAHSGLQ DGKASGVDLV GGYYDAGDNV KFGLPMAFTV TMMSWSIIEY
101: GKQMAASGEL GHAMEAVKWG TDYFIKAHPQ PNVLYGEVGD GNTDHYCWQR PEDMTTDRHA YKIDPSNPGS DLAGETAAAM AAASIVFRRS NPAYAAELLR
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSI SGYNDELLWA AAWLYQASNN QYYLDYLGRN GDSMGGTGWK MTEFGWDVKY AGVQTLVAKF LMQGKAGHHA
301: PVFERYQQKA ESFMCSCLGK GDRNVQKTPG GLIFRQRWNN MQFVTSASFL ATVYSDYLAS SGRNLRCSSG NVPPAELISL AKSQVDYLLG DNPRATSYMV
401: GYGSNFPQRV HHRGSSIVSI KVNPSFVSCR GGYATWFSSK RSDPNLLTGA LVGGPDAYDD FADERDNYEQ TEPATYNNAP LIGILARLGG GHGGYNQLLP
501: VVVPAPKPVV TKPQPTPSPK TTPPPASWSG PISIEQKMTT SWIAHGITYY RYSTVVTNKS NKSLNSLNLS ISKLYGPIWG VTKSGDSYTF PSWLSSLSAG
601: KSLEFVYIHS ASAADVSVTN YVLA
101: GKQMAASGEL GHAMEAVKWG TDYFIKAHPQ PNVLYGEVGD GNTDHYCWQR PEDMTTDRHA YKIDPSNPGS DLAGETAAAM AAASIVFRRS NPAYAAELLR
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSI SGYNDELLWA AAWLYQASNN QYYLDYLGRN GDSMGGTGWK MTEFGWDVKY AGVQTLVAKF LMQGKAGHHA
301: PVFERYQQKA ESFMCSCLGK GDRNVQKTPG GLIFRQRWNN MQFVTSASFL ATVYSDYLAS SGRNLRCSSG NVPPAELISL AKSQVDYLLG DNPRATSYMV
401: GYGSNFPQRV HHRGSSIVSI KVNPSFVSCR GGYATWFSSK RSDPNLLTGA LVGGPDAYDD FADERDNYEQ TEPATYNNAP LIGILARLGG GHGGYNQLLP
501: VVVPAPKPVV TKPQPTPSPK TTPPPASWSG PISIEQKMTT SWIAHGITYY RYSTVVTNKS NKSLNSLNLS ISKLYGPIWG VTKSGDSYTF PSWLSSLSAG
601: KSLEFVYIHS ASAADVSVTN YVLA
001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA
Arabidopsis Description
AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.