CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39987	Soybean	extracellular, vacuole	96.38	96.96
KRH23799	Soybean	extracellular, nucleus, vacuole	52.52	62.74
KRH55742	Soybean	vacuole	59.76	61.11
Solyc03g083820.1.1	Tomato	plastid	60.16	60.04
PGSC0003DMT400072087	Potato	golgi, vacuole	51.31	59.3
KRH41678	Soybean	nucleus	58.35	59.06
KRH60381	Soybean	nucleus	58.15	58.74
KRH51463	Soybean	extracellular	55.73	56.07
KRH60771	Soybean	extracellular, vacuole	55.33	56.01
KRH29353	Soybean	extracellular, vacuole	54.53	53.98
KRH68213	Soybean	nucleus	53.72	53.4
KRH31855	Soybean	nucleus	54.12	53.27
KRH69273	Soybean	extracellular, vacuole	54.12	53.06
KRG96467	Soybean	extracellular, vacuole	44.27	52.88
KRH56424	Soybean	extracellular, vacuole	50.7	52.07
KRH62487	Soybean	extracellular, vacuole	50.5	51.86
GSMUA_Achr11P...	Banana	cytosol	50.91	51.63
KRG97785	Soybean	extracellular	51.71	50.99
GSMUA_Achr11P...	Banana	vacuole	50.91	50.6
KRH27886	Soybean	extracellular	44.67	43.44
KRH52260	Soybean	extracellular, vacuole	41.25	42.44
KRG89135	Soybean	extracellular	41.25	42.27
KRH52262	Soybean	extracellular, vacuole	40.85	42.03
KRH73374	Soybean	vacuole	42.86	40.65
KRH14764	Soybean	cytosol, nucleus, vacuole	33.2	40.64
KRH73794	Soybean	vacuole	41.85	40.39
KRH14332	Soybean	vacuole	42.66	39.85
KRH60035	Soybean	nucleus	44.27	35.26
KRH41305	Soybean	nucleus	44.27	35.2
KRH29156	Soybean	extracellular, vacuole	42.45	33.65
KRH24186	Soybean	extracellular, vacuole	42.25	33.39

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100808980	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02007160	EnsemblPlantsGene:GLYMA_12G004800	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
UniProt:I1LNS2	InterPro:IPR012341	EnsemblPlants:KRH23800	ProteinID:KRH23800	ProteinID:KRH23800.1	PFAM:PF00759
ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF45	MetaCyc:PWY-6788	SUPFAM:SSF48208
SignalP:SignalP-noTM	UniParc:UPI000296BFB7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:365161..368805

Molecular Weight (calculated)

55070.3 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.151

Length

497 amino acids

Sequence
(BLAST)

001: MGFPQRLLFI LAAGTILSVT GLEHNYGEAL SKSILFFEGQ RSGKLPPTQR MTWRKDSALQ DVYIVPADTT VLPFLRNKVD LVGGYYDAGD NVKFNFPMAF
101: STTMLAWSVI EFGKFMGPDL KHALDAIRWA TEYFLKATSI PGFVFAQVGD PYADHNCWER PEDMDTPRTA FAVSRDFPGS EVSAEIAAAL AASSIVYRKY
201: HLGYSTRLLQ RAIKVFDFAD KYRGSYNDSL GPWVCPFYCD FSGYQDELVW GAAWLFKATK RPYYADYIDK NVHNLKNFAE FGWDSKDAGI NVLVSKLLIN
301: SSSNSKPFIL NNADKFVCSV LPESPSVLVS YSSGGLLFKP GGSNLQHATA ISFLFLVYAG YLKQTNKEID CGGKVFASPK RLKQIARGQV DYILGSNPAN
401: MSYMVGYGAK YPERIHHRAS SLPSVDEHRG HIGCKGGSFY FDNQNANPNL LVGAVVGGPD MKDSYADSRA DFVHSEPTTY INAPLVGVLA YFNSHPS

Best Arabidopsis Sequence Match ( AT1G02800.1 )
(BLAST)

001: MALYLSSSRL ITFLSFILLL SNGFSSSSSR PSIHHRHHLD NHNYKDALSK SILFFEGQRS GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF
101: GFPMAFTTTM LSWSLIEFGG LMKSELPNAK DAIRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD KNNPGSDIAG EIAAALAAAS
201: IVFRKCDPSY SNHLLQRAIT VFTFADKYRG PYSAGLAPEV CPFYCSYSGY QDELLWGAAW LQKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR
301: ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF LLLTYAKYLT SARTVAYCGG SVVTPARLRS IAKKQVDYLL
401: GGNPLKMSYM VGYGLKYPRR IHHRGSSLPS VAVHPTRIQC HDGFSLFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR SEPATYINAP LVGALAYLAR
501: S

Arabidopsis Description

CEL2Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.