CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51463	Soybean	extracellular	95.52	94.94
KRH29353	Soybean	extracellular, vacuole	82.48	80.68
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	79.84	79.19
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	75.97	75.35
Solyc01g110340.2.1	Tomato	extracellular, vacuole	75.56	74.8
Bra011881.1-P	Field mustard	cytosol	69.65	72.0
CDY42599	Canola	cytosol	69.65	72.0
AT4G39010.1	Thale cress	extracellular, vacuole	71.08	70.22
CDY41955	Canola	extracellular, vacuole	70.67	70.1
GSMUA_Achr1P07760_001	Banana	vacuole	70.88	69.46
GSMUA_Achr2P03400_001	Banana	extracellular	70.26	69.14
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	59.27	66.14
TraesCS5A01G317400.1	Wheat	plastid	68.64	66.08
TraesCS5B01G318000.1	Wheat	vacuole	68.84	65.89
HORVU5Hr1G081200.5	Barley	vacuole	68.43	65.24
Os09t0530200-01	Rice	mitochondrion	67.62	64.47
Zm00001d021280_P004	Maize	vacuole	69.86	62.36
OQU89810	Sorghum	extracellular, plastid, vacuole	70.47	61.9
TraesCS5D01G323700.2	Wheat	vacuole	69.04	61.64
KRH41678	Soybean	nucleus	59.27	59.27
KRH60381	Soybean	nucleus	58.86	58.74
KRH62487	Soybean	extracellular, vacuole	56.42	57.23
KRH56424	Soybean	extracellular, vacuole	56.42	57.23
Bra033592.1-P	Field mustard	extracellular	57.23	57.11
CDY22399	Canola	extracellular	57.23	57.11
KRH31855	Soybean	nucleus	58.66	57.03
KRH69273	Soybean	extracellular, vacuole	58.66	56.8
CDY41954	Canola	vacuole	53.97	56.75
CDX72723	Canola	extracellular	56.62	56.5
Bra011882.1-P	Field mustard	extracellular	56.62	56.5
KRH39987	Soybean	extracellular, vacuole	56.82	56.48
AT4G39000.1	Thale cress	extracellular, vacuole	56.62	56.39
CDY22400	Canola	extracellular, vacuole	53.16	56.13
Bra033591.1-P	Field mustard	extracellular, vacuole	55.6	55.71
CDY42597	Canola	extracellular	52.75	55.46
KRH68213	Soybean	nucleus	56.42	55.4
KRH23800	Soybean	extracellular, vacuole	56.01	55.33
KRH23799	Soybean	extracellular, nucleus, vacuole	46.03	54.33
KRG96467	Soybean	extracellular, vacuole	45.82	54.09
KRG97785	Soybean	extracellular	54.58	53.17
KRH55742	Soybean	vacuole	51.93	52.47
KRH27886	Soybean	extracellular	47.45	45.6
KRG89135	Soybean	extracellular	44.2	44.74
KRH73374	Soybean	vacuole	46.84	43.89
KRH14764	Soybean	cytosol, nucleus, vacuole	36.25	43.84
KRH73794	Soybean	vacuole	45.21	43.11
KRH52262	Soybean	extracellular, vacuole	41.96	42.65
KRH52260	Soybean	extracellular, vacuole	41.75	42.44
KRH14332	Soybean	vacuole	45.42	41.92
KRH60035	Soybean	nucleus	47.86	37.66
KRH41305	Soybean	nucleus	47.86	37.6
KRH24186	Soybean	extracellular, vacuole	45.82	35.77
KRH29156	Soybean	extracellular, vacuole	45.01	35.25

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100799911	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02002140	EnsemblPlantsGene:GLYMA_04G008400	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	UniProt:I1JSJ6
InterPro:IPR012341	EnsemblPlants:KRH60771	ProteinID:KRH60771	ProteinID:KRH60771.1	PFAM:PF00759	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	MetaCyc:PWY-6788	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000233A696
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:639941..644163

Molecular Weight (calculated)

54510.5 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.361

Length

491 amino acids

Sequence
(BLAST)

001: MAPPNFRAYS IILILLFVNS GSAHNYQEAL SKAILFFEGQ RSGFLPQDQR QNWRANSGLG DGWTYNVDLT GGYYDAGDNI KFGFPMAFTT TMLSWSVIEF
101: GDMMPPNEHR NALVAIRWAT DYLLKTVSQP NRIFVQVGDP ISDHNCWERP EDMDTSRTVY AVDAPNPASD VAGETAAALA AASMAFRSSD PGYSDTLLRN
201: AAKAFQFADT YRGAYSDNAD VRSGVCPYYC DFDGYQDELL WGAAWLRRAT QDENFLNYIQ SNGKTLGAED NINEFGWDNK HAGLNVLVSK EVLDGNVMSL
301: ESYKTSAESF LCTLIPETSS SHIEYTPGGL IYRPGGSNLQ HATSIAFLEL VYANYLSRTS QTINCGNIYV NAQTLRQHAK KQVDYILGDN PMRMSYMVGY
401: SNKYPQHIHH RGSSLPSIKD HPQFIACKEG SIYFNSSNPN PNVLVGAIVG GPGEDDVYED DRADFRKSEP TTYINAPFVG ILAYFVANPN P

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.