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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011881.1-P Field mustard cytosol 98.32 98.32
CDY41955 Canola extracellular, vacuole 98.32 94.34
AT4G39010.1 Thale cress extracellular, vacuole 92.84 88.73
KRH60771 Soybean extracellular, vacuole 72.0 69.65
KRH29353 Soybean extracellular, vacuole 72.84 68.92
PGSC0003DMT400008105 Potato endoplasmic reticulum, extracellular, vacuole 71.79 68.89
VIT_03s0038g00630.t01 Wine grape extracellular, vacuole 71.58 68.69
KRH51463 Soybean extracellular 71.16 68.42
Solyc01g110340.2.1 Tomato extracellular, vacuole 70.95 67.94
GSMUA_Achr2P03400_001 Banana extracellular 64.63 61.52
GSMUA_Achr1P07760_001 Banana vacuole 64.63 61.28
GSMUA_Achr9P20920_001 Banana extracellular, vacuole 55.58 60.0
CDY22400 Canola extracellular, vacuole 58.11 59.35
TraesCS5A01G317400.1 Wheat plastid 63.37 59.02
CDY22399 Canola extracellular 61.05 58.94
TraesCS5B01G318000.1 Wheat vacuole 63.37 58.67
CDX72723 Canola extracellular 60.63 58.54
HORVU5Hr1G081200.5 Barley vacuole 63.16 58.25
CDY41954 Canola vacuole 56.84 57.82
CDY42597 Canola extracellular 56.63 57.6
Os09t0530200-01 Rice mitochondrion 62.11 57.28
CDY04737 Canola extracellular, vacuole 58.74 56.71
CDX68334 Canola endoplasmic reticulum 58.11 56.56
CDY23486 Canola extracellular 58.11 56.56
CDY21424 Canola extracellular 58.74 56.48
CDY11552 Canola endoplasmic reticulum, extracellular 58.53 55.71
CDX96271 Canola extracellular, vacuole 58.53 55.71
TraesCS5D01G323700.2 Wheat vacuole 63.79 55.09
Zm00001d021280_P004 Maize vacuole 63.37 54.73
OQU89810 Sorghum extracellular, plastid, vacuole 64.21 54.56
CDY32480 Canola extracellular, vacuole 58.74 54.49
CDY37459 Canola endoplasmic reticulum, extracellular 57.68 53.73
CDY12503 Canola extracellular, vacuole 54.53 53.62
CDY25758 Canola extracellular, vacuole 54.32 53.42
CDY03686 Canola extracellular 54.11 53.21
CDX96319 Canola extracellular, plastid, vacuole 53.89 52.89
CDY66787 Canola extracellular, plastid, vacuole 53.68 52.69
CDX97262 Canola vacuole 56.84 52.53
CDY03687 Canola extracellular 53.47 52.48
CDY37936 Canola extracellular 50.32 52.41
CDY37939 Canola extracellular, vacuole 53.26 52.38
CDY22043 Canola extracellular, vacuole 55.79 51.16
CDY52780 Canola extracellular, vacuole 55.58 50.97
CDX94202 Canola vacuole 49.68 49.17
CDY10945 Canola extracellular, vacuole 49.47 48.96
CDY44116 Canola extracellular 49.05 48.54
CDY01915 Canola cytosol 36.84 48.21
CDY10895 Canola extracellular 48.21 47.71
CDX83426 Canola extracellular, plastid, vacuole 45.68 45.3
CDX74666 Canola vacuole 45.26 43.97
CDY30943 Canola golgi, vacuole 44.84 43.83
CDY21221 Canola golgi, vacuole 44.84 43.83
CDX74668 Canola extracellular 45.47 43.81
CDX95605 Canola extracellular, vacuole 45.89 43.69
CDY47674 Canola extracellular, vacuole 45.26 43.61
CDX87948 Canola extracellular, vacuole 44.42 43.42
CDY12319 Canola cytosol, extracellular, vacuole 44.42 43.42
CDY47675 Canola vacuole 44.63 43.35
CDX74664 Canola extracellular, vacuole 44.42 43.15
CDX74667 Canola extracellular, vacuole 38.53 42.26
CDY17123 Canola vacuole 45.47 41.38
CDY60076 Canola extracellular 21.05 41.32
CDY19428 Canola vacuole 45.05 41.0
CDY19174 Canola vacuole 45.26 40.8
CDY23776 Canola vacuole 44.63 40.3
CDX90780 Canola endoplasmic reticulum, extracellular 47.16 35.78
CDY05130 Canola extracellular, vacuole 47.16 35.78
CDY47849 Canola extracellular, vacuole 45.47 34.84
CDY34422 Canola endoplasmic reticulum, extracellular, vacuole 45.47 34.84
CDY46529 Canola extracellular, vacuole 45.26 34.62
CDY65179 Canola extracellular 44.0 33.39
CDY60075 Canola vacuole 44.0 33.39
CDX93707 Canola vacuole 43.58 33.17
CDY59895 Canola cytosol, vacuole 33.89 31.76
CDY08373 Canola cytosol, extracellular, mitochondrion, nucleus 24.21 27.25
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfGO:A0A078HZ51
UniProt:A0A078HZ51EnsemblPlants:CDY42599ProteinID:CDY42599ProteinID:CDY42599.1GO:GO:0000272GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008810
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0016798GO:GO:0030245EnsemblPlantsGene:GSBRNA2T00075104001
InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_Asp/Glu_ASInterPro:Glyco_hydro_9_His_ASInterPro:IPR012341PFAM:PF00759ScanProsite:PS00592
ScanProsite:PS00698PANTHER:PTHR22298PANTHER:PTHR22298:SF29MetaCyc:PWY-6788SUPFAM:SSF48208UniParc:UPI0004EE2D4C
SEG:seg:::::
Description
BnaC01g00110DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078HZ51]
Coordinates
chrLK032530:-:30700..33737
Molecular Weight (calculated)
52576.3 Da
IEP (calculated)
4.775
GRAVY (calculated)
-0.385
Length
475 amino acids
Sequence
(BLAST)
001: MSSKQHDYSD ALSKSILFFE GQRSGYLPND QRVRWRRNSG LSDGWTHNTD LTGGYYDAGD NVKFNFPMAF TTTMLAWSVI EFGELMPPPE LRNALVALRW
101: SSDYLLKSVS QLPNRIFVQV GDPIADHNCW ERPEDMDTPR TAYVVNAPNP ASEVAGEITA ALSAASIAVR SSDPGYSQTL LQNAVKTFQF ADMHRGAYSS
201: NDDIKNDVCP FYCDFNGFQD ELLWGAAWLR KGTGDESYLS YIESNREPFG ASENVDEFGW DNKIGGLNVL VSKEVIAGNM YNLEAYKASA ESFMCSLVPE
301: SPGQHVEYTP GGLLYKPGGS QLQHATTISF LLLVYAQYLS RSSLSLNCGS LSVPPDHLRR LAKKQVDYIL GENPMGLSYM VGYGERYPKR IHHRGSSLPS
401: IVDHPGTIGC KDGSVYFNST EPNPNVLIGA VVGGPEEDDK YDDDRSDFRK SEPTTYINAP FVGVLAYFAA NPSFS
Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)
001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS
Arabidopsis Description
AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.