CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96319	Canola	extracellular, plastid, vacuole	97.73	97.73
AT1G71380.1	Thale cress	extracellular	89.67	89.67
CDY25758	Canola	extracellular, vacuole	84.5	84.68
CDY12503	Canola	extracellular, vacuole	83.88	84.06
CDY03687	Canola	extracellular	82.64	82.64
CDY37939	Canola	extracellular, vacuole	80.58	80.75
CDY03686	Canola	extracellular	79.55	79.71
CDY37936	Canola	extracellular	74.38	78.95
KRH56424	Soybean	extracellular, vacuole	75.0	75.0
KRH62487	Soybean	extracellular, vacuole	74.38	74.38
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	72.11	70.65
Solyc11g040340.1.1	Tomato	extracellular, vacuole	66.94	67.64
PGSC0003DMT400021687	Potato	vacuole	66.94	67.22
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	58.68	61.47
TraesCS6D01G089200.1	Wheat	golgi	53.31	59.72
Zm00001d025475_P001	Maize	extracellular, vacuole	62.4	59.33
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	60.33	58.52
Os04t0443300-00	Rice	vacuole	60.33	58.4
TraesCS6B01G122000.1	Wheat	vacuole	49.17	58.05
TraesCS2D01G308500.1	Wheat	golgi	59.71	58.03
TraesCS6A01G093200.1	Wheat	golgi	59.5	57.95
TraesCS2B01G327200.1	Wheat	nucleus	60.74	57.87
EES12225	Sorghum	plastid	60.95	57.28
TraesCS2A01G310200.1	Wheat	vacuole	59.71	57.23
CDY32480	Canola	extracellular, vacuole	57.85	54.69
CDY37459	Canola	endoplasmic reticulum, extracellular	57.44	54.51
CDY23486	Canola	extracellular	54.96	54.51
CDX68334	Canola	endoplasmic reticulum	54.75	54.3
CDX97262	Canola	vacuole	57.02	53.7
CDY42599	Canola	cytosol	52.69	53.68
CDY22043	Canola	extracellular, vacuole	57.44	53.67
CDY52780	Canola	extracellular, vacuole	57.23	53.47
CDX96271	Canola	extracellular, vacuole	54.75	53.11
CDY21424	Canola	extracellular	54.13	53.04
CDY11552	Canola	endoplasmic reticulum, extracellular	54.55	52.91
CDY04737	Canola	extracellular, vacuole	53.31	52.44
CDY41955	Canola	extracellular, vacuole	53.1	51.92
CDY10945	Canola	extracellular, vacuole	48.76	49.17
CDX94202	Canola	vacuole	48.55	48.96
CDY01915	Canola	cytosol	36.36	48.48
CDY10895	Canola	extracellular	47.52	47.92
CDY44116	Canola	extracellular	47.52	47.92
CDX72723	Canola	extracellular	47.31	46.54
CDY22399	Canola	extracellular	47.31	46.54
CDY41954	Canola	vacuole	44.42	46.04
CDY21221	Canola	golgi, vacuole	46.07	45.88
CDY30943	Canola	golgi, vacuole	46.07	45.88
CDY42597	Canola	extracellular	44.21	45.82
CDY22400	Canola	extracellular, vacuole	44.01	45.81
CDX87948	Canola	extracellular, vacuole	45.87	45.68
CDY12319	Canola	cytosol, extracellular, vacuole	45.87	45.68
CDX74664	Canola	extracellular, vacuole	46.07	45.6
CDX74667	Canola	extracellular, vacuole	40.5	45.27
CDY47674	Canola	extracellular, vacuole	46.07	45.23
CDX74668	Canola	extracellular	46.07	45.23
CDY60076	Canola	extracellular	22.52	45.04
CDX74666	Canola	vacuole	45.25	44.79
CDX83426	Canola	extracellular, plastid, vacuole	44.01	44.47
CDY47675	Canola	vacuole	44.83	44.38
CDY17123	Canola	vacuole	45.87	42.53
CDY19428	Canola	vacuole	45.66	42.34
CDY19174	Canola	vacuole	46.07	42.31
CDX95605	Canola	extracellular, vacuole	43.39	42.08
CDY23776	Canola	vacuole	45.45	41.83
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	47.73	37.26
CDY47849	Canola	extracellular, vacuole	47.73	37.26
CDY46529	Canola	extracellular, vacuole	47.52	37.04
CDY05130	Canola	extracellular, vacuole	46.9	36.26
CDX90780	Canola	endoplasmic reticulum, extracellular	46.28	35.78
CDY65179	Canola	extracellular	44.83	34.66
CDY60075	Canola	vacuole	44.83	34.66
CDX93707	Canola	vacuole	44.63	34.62
CDY59895	Canola	cytosol, vacuole	33.47	31.95
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	25.21	28.91

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:21.1.3.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:A0A078JN75
UniProt:A0A078JN75	EnsemblPlants:CDY66787	ProteinID:CDY66787	ProteinID:CDY66787.1	GO:GO:0000272	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	EnsemblPlantsGene:GSBRNA2T00055753001
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF54	MetaCyc:PWY-6788	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0004EB6741	SEG:seg

Description

BnaC06g43770DEndoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A078JN75]

Coordinates

chrLK035466:-:487..2449

Molecular Weight (calculated)

53569.2 Da

IEP (calculated)

9.043

GRAVY (calculated)

-0.356

Length

484 amino acids

Sequence
(BLAST)

001: MTSLFFLVLL SSPLLTRNVE ANPNYREALS KSLLFFQGQR SGRLPRDQQV SWRASSGLSD GSTAHVDLTG GYYDAGDNIK FNFPMAFTTT MLSWSTLEYG
101: KRMGPELKNA RENIRWGTDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSSSNPGSDV AAETAAALAA ASMVFRKADP KYSRLLLATA
201: KNVMQFAIQY RGAYSDSLSS SVCPFYCSYS GYKDELMWGA AWLLRATNNP YYENLIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQSA
301: ENFMCKILPN SPSSSTQYTQ GGLMYKLPQS NLQYVTAITF LLTTYAKYMK STKHTFTCGN SVIVPDALIS ISKQQVDYIL GENPIKMSYM VGFGRSFPKR
401: IHHRASSLPS HALLSKPLGC NGGFQSFYSQ NPNPNVLTGA IVGGPNQSDG YPDQRDDYSH SEPATYINAA FVGPLAYFSS GRSA

Best Arabidopsis Sequence Match ( AT1G71380.1 )
(BLAST)

001: MTSLFFFVLL FSSLLISNGD ANPNYKEALS KSLLFFQGQR SGPLPRGQQI SWRASSGLSD GSAAHVDLTG GYYDAGDNVK FNLPMAFTTT MLSWSALEYG
101: KRMGPELENA RVNIRWATDY LLKCARATPG KLYVGVGDPN VDHKCWERPE DMDTPRTVYS VSASNPGSDV AAETAAALAA ASMVFRKVDS KYSRLLLATA
201: KDVMQFAIQY QGAYSDSLSS SVCPFYCSYS GYKDELMWGA SWLLRATNNP YYANFIKSLG GGDQPDIFSW DNKYAGAYVL LSRRALLNKD SNFEQYKQAA
301: ENFICKILPD SPSSSTQYTQ GGLMYKLPQS NLQYVTSITF LLTTYAKYMK ATKHTFNCGS SVIVPNALIS LSKRQVDYIL GDNPIKMSYM VGFSSNFPKR
401: IHHRASSLPS HALRSQSLGC NGGFQSFYTQ NPNPNILTGA IVGGPNQNDG YPDQRDDYSH AEPATYINAA FVGPLAYFAA GRST

Arabidopsis Description

CEL3Endoglucanase [Source:UniProtKB/TrEMBL;Acc:Q0V7W1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.