CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
mitochondrion 1
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74664	Canola	extracellular, vacuole	99.77	88.34
Bra004844.1-P	Field mustard	extracellular, vacuole	98.38	87.12
CDX74666	Canola	vacuole	89.15	78.94
CDY47675	Canola	vacuole	87.99	77.91
CDX74668	Canola	extracellular	79.68	69.98
CDY47674	Canola	extracellular, vacuole	79.21	69.57
AT2G44560.1	Thale cress	extracellular, vacuole	76.21	67.21
AT2G44540.1	Thale cress	vacuole	75.98	67.01
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	74.83	66.12
CDX83426	Canola	extracellular, plastid, vacuole	69.98	63.26
CDX95605	Canola	extracellular, vacuole	70.67	61.32
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	61.2	54.87
CDY60076	Canola	extracellular	30.25	54.13
PGSC0003DMT400069884	Potato	extracellular, vacuole	59.35	53.65
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	59.35	53.54
Solyc05g052530.1.1	Tomato	extracellular	59.58	53.09
KRG89135	Soybean	extracellular	57.97	51.75
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	50.35	48.55
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	52.66	46.53
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	52.42	46.33
TraesCS1D01G075100.1	Wheat	vacuole	52.19	46.12
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	48.96	45.69
TraesCS1A01G072300.1	Wheat	vacuole	51.73	45.34
TraesCS1A01G072100.1	Wheat	nucleus	51.27	45.31
HORVU1Hr1G015550.1	Barley	vacuole	50.58	44.69
TraesCS1D01G074800.1	Wheat	vacuole	47.81	44.61
KXG21209	Sorghum	cytosol	39.49	43.96
CDX94202	Canola	vacuole	47.81	43.12
CDY10945	Canola	extracellular, vacuole	47.58	42.92
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	49.88	42.19
CDY44116	Canola	extracellular	46.19	41.67
Zm00001d035442_P001	Maize	extracellular, vacuole	39.95	41.49
CDY10895	Canola	extracellular	45.73	41.25
CDY25758	Canola	extracellular, vacuole	45.96	41.2
CDY12503	Canola	extracellular, vacuole	45.73	40.99
CDY12319	Canola	cytosol, extracellular, vacuole	45.96	40.95
CDX87948	Canola	extracellular, vacuole	45.96	40.95
CDX96319	Canola	extracellular, plastid, vacuole	45.73	40.91
CDY21221	Canola	golgi, vacuole	45.73	40.74
CDY30943	Canola	golgi, vacuole	45.73	40.74
CDY17123	Canola	vacuole	48.96	40.61
CDY66787	Canola	extracellular, plastid, vacuole	45.27	40.5
CDY19428	Canola	vacuole	48.73	40.42
CDY37939	Canola	extracellular, vacuole	44.57	39.96
CDY19174	Canola	vacuole	48.5	39.85
CDY32480	Canola	extracellular, vacuole	47.11	39.84
CDY23486	Canola	extracellular	44.8	39.75
CDY23776	Canola	vacuole	48.27	39.73
CDY03687	Canola	extracellular	44.34	39.67
CDY41954	Canola	vacuole	42.73	39.61
CDY37459	Canola	endoplasmic reticulum, extracellular	46.65	39.61
CDX68334	Canola	endoplasmic reticulum	44.34	39.34
CDY04737	Canola	extracellular, vacuole	44.57	39.23
CDY42597	Canola	extracellular	42.26	39.19
CDY03686	Canola	extracellular	43.65	39.13
CDX96271	Canola	extracellular, vacuole	44.8	38.88
CDY11552	Canola	endoplasmic reticulum, extracellular	44.8	38.88
CDX97262	Canola	vacuole	45.96	38.72
CDY21424	Canola	extracellular	44.11	38.66
CDY42599	Canola	cytosol	42.26	38.53
CDY22399	Canola	extracellular	43.65	38.41
CDY37936	Canola	extracellular	40.42	38.38
CDY52780	Canola	extracellular, vacuole	45.5	38.03
CDY22043	Canola	extracellular, vacuole	45.27	37.84
CDX72723	Canola	extracellular	42.96	37.8
CDY22400	Canola	extracellular, vacuole	40.42	37.63
CDY41955	Canola	extracellular, vacuole	42.96	37.58
CDY34422	Canola	endoplasmic reticulum, extracellular, vacuole	51.73	36.13
CDY47849	Canola	extracellular, vacuole	51.73	36.13
CDY05130	Canola	extracellular, vacuole	52.19	36.1
CDX90780	Canola	endoplasmic reticulum, extracellular	52.19	36.1
CDY46529	Canola	extracellular, vacuole	51.5	35.91
CDY65179	Canola	extracellular	51.5	35.62
CDY60075	Canola	vacuole	51.5	35.62
CDX93707	Canola	vacuole	51.27	35.58
CDY59895	Canola	cytosol, vacuole	38.34	32.74
CDY01915	Canola	cytosol	24.71	29.48
CDY08373	Canola	cytosol, extracellular, mitochondrion, nucleus	22.86	23.46

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:A0A078CCT2
EnsemblPlants:CDX74667	ProteinID:CDX74667	ProteinID:CDX74667.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00116617001
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF12	MetaCyc:PWY-6788	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0004EE8388	SEG:seg

Description

BnaA05g04130D

Coordinates

chrLK031802:+:88943..90505

Molecular Weight (calculated)

48118.6 Da

IEP (calculated)

6.748

GRAVY (calculated)

-0.341

Length

433 amino acids

Sequence
(BLAST)

001: MSQLRSGSSQ CLWTSTLFIA LLSMPMTHGA NYGEALTKSL LYFEAQRSGK LPPNQRVNWR GDSALRDGSD AHVDLTGGYY DAGDNMKFGF PMAFTTTMLA
101: WSSVEWESEL KAHKEHRNVL DAIKWATDYF IKAHPEPNVL YGQVGDGKSD HACWMRPEDM TTPRPSYRID AQHPGADLAG ETAAAMAAAS LAFRKYDEAY
201: AEELIGHAKD LFEFAKAYPG VYHSSITDAG GFYPSSGYQD ELFWAAAWLH RATKSQTYLD YLTDVYGTGG QRTVFAWDDK FVGAQVLIAK LALEREGMFN
301: DKLEDYKNMA EYFICNCVQM GSNNVKVTPG GLLWFLPWNN FQYTTTASFV LAAYSKYLNA TKKPIDCPSG TFQAADLLHH ARVQADYILG SNPKSMSYMV
401: GFGTNYPKRP HHRGASIVSI KNSSTPVTCT GGF

Best Arabidopsis Sequence Match ( AT2G44540.1 )
(BLAST)

001: MSQSKNGSSQ CLWTSICIVV LVMSMARGAV STNYAEALQK SLLYFEAQRS GKLPPNQKVT WRGDSALKDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMGS ELRAHHEQGN SLRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPFDK
201: AYANILIGHA KDLFAFAKAH PGLYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LNYLTQASGT GGPRSVFAWD DKFVGAQVLM AKLALERKVG
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTTAS FVLSAYSKYL TKAKASIQCP KGALQASDLL QIARSQVDYI LGSNPQKMSY
401: MVGVGTNYPK KPHHRAASIV SIRKDKTPVT CSGGYDKWYN NPAPNPNVLM GALVGGPNEN DVYGDERSNF QQAEPATVTV APFVGVLAAV F

Arabidopsis Description

AtGH9B9Endoglucanase 12 [Source:UniProtKB/Swiss-Prot;Acc:O64889]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.