Factsheet for TraesCS1A01G072300.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	93.93	94.69
TraesCS1A01G072100.1	Wheat	nucleus	93.12	93.88
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	92.71	93.47
HORVU1Hr1G015550.1	Barley	vacuole	89.47	90.2
KXG21209	Sorghum	cytosol	52.02	66.07
Zm00001d035442_P001	Maize	extracellular, vacuole	53.24	63.07
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	64.98	62.7
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	52.83	58.13
PGSC0003DMT400069884	Potato	extracellular, vacuole	54.86	56.58
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	54.86	56.46
Bra004846.1-P	Field mustard	nucleus	53.44	56.17
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	54.86	56.11
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	55.26	55.71
AT2G44540.1	Thale cress	vacuole	55.26	55.6
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	53.44	55.46
CDX83426	Canola	extracellular, plastid, vacuole	53.44	55.11
AT2G44560.1	Thale cress	extracellular, vacuole	54.25	54.58
Solyc05g052530.1.1	Tomato	extracellular	53.64	54.53
AT2G44570.1	Thale cress	extracellular	54.05	54.27
CDX74668	Canola	extracellular	53.85	53.96
CDY47674	Canola	extracellular, vacuole	53.04	53.14
CDX74666	Canola	vacuole	52.23	52.76
KRG89135	Soybean	extracellular	51.62	52.58
Bra004845.1-P	Field mustard	extracellular	51.82	52.35
CDY47675	Canola	vacuole	51.62	52.15
CDX95605	Canola	extracellular, vacuole	52.63	52.1
CDX74667	Canola	extracellular, vacuole	45.34	51.73
CDX74664	Canola	extracellular, vacuole	50.4	50.92
Bra004844.1-P	Field mustard	extracellular, vacuole	49.8	50.31
TraesCS5A01G172100.1	Wheat	extracellular, vacuole	49.39	48.9
TraesCS7A01G317700.1	Wheat	extracellular	48.38	48.38
TraesCS7A01G144500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.98	46.02
TraesCS7A01G144700.1	Wheat	vacuole	47.98	45.75
TraesCS6A01G122100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.58	45.37
TraesCS5A01G317400.1	Wheat	plastid	46.56	45.1
TraesCS5A01G172200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.38	45.09
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	47.98	44.97
TraesCS5A01G202600.1	Wheat	vacuole	48.79	44.96
TraesCS7A01G144400.1	Wheat	cytosol, vacuole	37.85	44.74
TraesCS7A01G204500.1	Wheat	extracellular	45.34	44.53
TraesCS6A01G312400.1	Wheat	vacuole	48.38	44.34
TraesCS1A01G088700.1	Wheat	extracellular	45.34	44.27
TraesCS6A01G295300.1	Wheat	extracellular	44.33	44.15
TraesCS6A01G093200.1	Wheat	golgi	43.52	43.26
TraesCS2A01G310200.1	Wheat	vacuole	42.51	41.58
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	47.98	40.65
TraesCS1A01G389300.1	Wheat	extracellular, vacuole	50.2	39.94
TraesCS6A01G337300.1	Wheat	mitochondrion	40.08	39.05
TraesCS3A01G144600.1	Wheat	extracellular, vacuole	49.8	39.05
TraesCS2A01G556300.1	Wheat	vacuole	47.77	36.59

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PFscan:PS51257
PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1A01G072300	EnsemblPlants:TraesCS1A01G072300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:56337402..56339522

Molecular Weight (calculated)

53771.8 Da

IEP (calculated)

9.091

GRAVY (calculated)

-0.266

Length

494 amino acids

Sequence
(BLAST)

001: MVARARVLLI AAVVWFLATT ACQAAQRDYA TALTKSLLYF EAQRSGRLPT TQRVQWRGDS ALKDGADHGV DLTGGYYDSG DNVKFGFPMA FTVTMLSWSV
101: VEHRGRLATA GELGHALQAV QWGADYLAKA HTRPDVLYVN VGDGHSDHAC WERPEDMETP RRSYMVNATH PGSDVAAETA AALAAASVAF TGPHTGPHGD
201: PRYALTLLKH AKQLFQFAKN HRGLYQNSIP SARSFYRSSG DEDELLWAAV WLYIATGHQE YKAYIAGANN VGGVRQSLGW DDKFVGAQAL VAKLILKGKL
301: PNNGRHAEMR SNVESFLCNV LQHGDGRSGR LTPGGMLYLQ PWSNLQDVTT AMFVLVTHAD HLAAASASLQ CGGVRLPPAQ LVSFARSQVD YILGKNPMKM
401: SYMVGVGKRY PLQPHHRGAS LPSIRKYPGK ISCGKGAEYF HRSAPNLNVI DGAIVGGPDN NDHYDDSRGN YQQGEPSTYT VAPIVGVLAR LLHN

Best Arabidopsis Sequence Match ( AT2G44570.1 )
(BLAST)

001: MSCISSQCFI TIKSICIVLL LSITCGAVSA NSNYGEALTK SLLYFEAQRS GKLPLDQRVI WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSSVEMES QLKAHQEHGN TLAALRWATD YLIKAHPEPN VLYGQVGDAN LDHACWMRPE DMTTPRPSYR IDPQHPGADL AGETAAAMAA ASLAFAPSDS
201: AYAKTLISHA KELFEFAKDY PGVYHNSIPN AGGFYPSSGY EDELLWAAAW LHRATGDQTY LDHLTQASNS GGARSVFAWD DKFLGAQVLV AKLVFEGKVK
301: NEGKMIEYKS MAEQFICNCA QKGFNNVKKT PGGLLWFLPW DNLQYTATAS FALATYAKYL EAAQTSIQCP NGDVLQASDL LNLARAQVDY ILGSNPKKMS
401: YMVGYGTNYP KRPHHRGASI VSIKNDPKPV TCNGGFEAWY NNPKPNPNLL VGAIVGGPDE YDAYGDERSD FQHGEPDTVT VAPLLGVLAA IA

Arabidopsis Description

AtGH9B12Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.