Factsheet for GSMUA_Achr6P15630_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	66.59	61.9
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	62.58	58.54
PGSC0003DMT400069884	Potato	extracellular, vacuole	59.69	55.95
CDX83426	Canola	extracellular, plastid, vacuole	59.24	55.53
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	58.8	55.46
Solyc05g052530.1.1	Tomato	extracellular	59.24	54.73
AT2G44550.1	Thale cress	extracellular, plasma membrane, vacuole	59.69	54.69
KRG89135	Soybean	extracellular	59.02	54.64
KXG21209	Sorghum	cytosol	46.99	54.24
AT2G44560.1	Thale cress	extracellular, vacuole	59.02	53.97
Bra004846.1-P	Field mustard	nucleus	56.35	53.83
TraesCS1D01G075100.1	Wheat	vacuole	58.35	53.47
TraesCS1D01G074700.1	Wheat	extracellular, vacuole	58.35	53.47
AT2G44570.1	Thale cress	extracellular	58.57	53.46
TraesCS1A01G072100.1	Wheat	nucleus	57.91	53.06
AT2G44540.1	Thale cress	vacuole	57.91	52.95
CDX95605	Canola	extracellular, vacuole	58.8	52.91
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	57.68	52.86
TraesCS1A01G072300.1	Wheat	vacuole	58.13	52.83
TraesCS1D01G074900.1	Wheat	cytosol, mitochondrion, plastid, vacuole	54.34	52.59
TraesCS1D01G074800.1	Wheat	vacuole	54.34	52.59
HORVU1Hr1G015550.1	Barley	vacuole	57.24	52.45
CDX74668	Canola	extracellular	57.46	52.33
CDY47674	Canola	extracellular, vacuole	57.24	52.13
CDY47675	Canola	vacuole	56.57	51.94
CDX74666	Canola	vacuole	56.57	51.94
Bra004845.1-P	Field mustard	extracellular	56.35	51.74
CDX74667	Canola	extracellular, vacuole	48.55	50.35
CDX74664	Canola	extracellular, vacuole	54.57	50.1
Bra004844.1-P	Field mustard	extracellular, vacuole	54.57	50.1
Zm00001d035442_P001	Maize	extracellular, vacuole	46.33	49.88
Os05t0129200-00	Rice	endoplasmic reticulum, extracellular, vacuole	56.79	49.8
GSMUA_Achr2P05330_001	Banana	vacuole	47.88	44.79
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	45.88	44.59
GSMUA_Achr7P02160_001	Banana	vacuole	50.56	44.51
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	45.43	44.44
GSMUA_Achr11P...	Banana	extracellular, vacuole	49.89	44.27
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	43.88	43.97
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.99	43.96
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	49.44	43.53
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	42.32	42.04
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	46.33	41.68
GSMUA_Achr11P...	Banana	vacuole	45.43	40.8
GSMUA_Achr11P...	Banana	cytosol	43.88	40.2
GSMUA_Achr1P07760_001	Banana	vacuole	44.77	40.12
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	38.75	39.55
GSMUA_Achr2P03770_001	Banana	vacuole	53.45	39.41
GSMUA_Achr6P22750_001	Banana	vacuole	45.43	39.23
GSMUA_Achr2P03400_001	Banana	extracellular	43.21	38.88
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	49.22	37.78
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	44.1	24.29

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
EnsemblPlantsGene:GSMUA_Achr6G15630_001	EnsemblPlants:GSMUA_Achr6P15630_001	EnsemblPlants:GSMUA_Achr6T15630_001	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M0T7B1	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PFscan:PS51257
PANTHER:PTHR22298	PANTHER:PTHR22298:SF12	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI0002959363	SEG:seg

Description

Endoglucanase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15630_001]

Coordinates

chr6:-:10447510..10449278

Molecular Weight (calculated)

48206.5 Da

IEP (calculated)

5.227

GRAVY (calculated)

-0.180

Length

449 amino acids

Sequence
(BLAST)

001: MAPKTLLLLS LILVLLLGQS CATKDYGLAL TKSLLFFEAQ RSGKLPPGQR VTWRGDSAPN DGKDNGVDLS GGYFDAGDNV KFGFPLAYSL TAIAWGVVEF
101: NSRLEAKKEI GNALAALRWG TDYLIHAHPQ PDVLYVEVGD GSSDHDCWQR PEDMSTPRTS YKIDDSKPGS DVAAESAAAL AAASIAFKGS DPKYSGTLLT
201: HAKQLLEFAR NHRGLYQNSV PQAGQFYSSS GDDDEIVWAA AWLHRATGEQ TYLDILSSGN NGGVRSMFSW DDKYVGAQLL LLLEGKVPNS GPWAAYKNNV
301: DMFYVTSSML VVSTYADYLS AAKATLSCPQ GSVSPQDLIS FATSQVDYIL GANPKAMSYM VGFGSNFPVQ VHHRGASIVS IKADPKSIGC KEGFDWFNRN
401: SPNPNVLDGA LVGGPDANDA YTDSRSNYQQ AEPAIATNAA LIGVLARLA

Best Arabidopsis Sequence Match ( AT2G44550.1 )
(BLAST)

001: MSQLKNGSSQ CLWTSICIVL IVMSMAREAV STNYAEALKN SLLYFEAQRS GKLPPNQRVT WRGDSALRDG SDAHIDLTGG YYDAGDNMKF GFPLAFTTTM
101: LAWSNIEMAS QLRAHHEKGN ALRALKWATD YLIKAHPQPN VLYGQVGEGN SDHKCWMRPE DMTTPRTSYR IDAQHPGSDL AGETAAAMAA ASIAFAPSDK
201: AYANILIGHA KDLFAFAKAH RGLYQNSIPN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTEAETG GPRTVFAWDD KFVGAQVLVA KLALEGKVES
301: SEQIVEYKSM AEQFICNCAQ KGDNNVKKTP GGLLYFLPWN NLQYTTAATF VLSAYSKYLE AAKASIDCPD GALQASDLLQ VARSQVDYIL GSNPQKMSYM
401: VGVGTNYPKK PHHRAASIVS IRQDKTPVTC SGGYDKWYNN PAPNPNVLAG AVVGGPDDND VYGDERSNFQ QAEPATVTTA PLVGVLALVF

Arabidopsis Description

AtGH9B10Endoglucanase 13 [Source:UniProtKB/Swiss-Prot;Acc:O64890]
SUBAcon: [extracellular,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.