Factsheet for GSMUA_Achr11P05440_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68213	Soybean	nucleus	77.27	78.2
KRH31855	Soybean	nucleus	77.87	78.02
VIT_07s0005g00740.t01	Wine grape	plastid	78.46	77.69
KRH69273	Soybean	extracellular, vacuole	77.67	77.51
KRG96467	Soybean	extracellular, vacuole	63.04	76.68
PGSC0003DMT400081314	Potato	extracellular	74.7	75.6
Solyc09g075360.2.1	Tomato	plastid	74.9	74.31
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	72.33	73.64
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	72.13	73.29
AT4G02290.1	Thale cress	plastid	74.7	73.26
Os01t0312800-01	Rice	extracellular	71.94	72.95
AT1G02800.1	Thale cress	extracellular, vacuole	72.13	72.85
CDY22043	Canola	extracellular, vacuole	74.51	72.78
Bra036281.1-P	Field mustard	extracellular, vacuole	74.51	72.78
CDX97262	Canola	vacuole	73.52	72.37
CDY52780	Canola	extracellular, vacuole	73.91	72.2
Bra018559.1-P	Field mustard	extracellular, vacuole	73.32	72.18
Bra032584.1-P	Field mustard	extracellular, vacuole	73.72	72.15
CDY32480	Canola	extracellular, vacuole	72.92	72.07
CDY37459	Canola	endoplasmic reticulum, extracellular	71.94	71.37
EES00659	Sorghum	vacuole	70.16	70.86
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	72.73	70.23
Zm00001d009097_P001	Maize	extracellular	71.94	70.0
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	72.73	69.83
CDY01915	Canola	cytosol	47.04	65.56
GSMUA_Achr1P08170_001	Banana	endoplasmic reticulum, extracellular, vacuole	56.13	63.39
GSMUA_Achr1P07760_001	Banana	vacuole	59.29	59.88
GSMUA_Achr6P07430_001	Banana	extracellular, vacuole	54.55	59.74
GSMUA_Achr5P05960_001	Banana	extracellular, vacuole	58.89	59.72
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	51.58	59.32
GSMUA_Achr8P12170_001	Banana	endoplasmic reticulum, extracellular, vacuole	51.78	57.96
GSMUA_Achr2P03400_001	Banana	extracellular	56.13	56.91
GSMUA_Achr11P...	Banana	cytosol	50.99	52.65
GSMUA_Achr11P...	Banana	vacuole	50.79	51.4
GSMUA_Achr6P15630_001	Banana	extracellular, vacuole	44.27	49.89
GSMUA_Achr3P28200_001	Banana	endoplasmic reticulum, golgi, vacuole	41.9	46.19
GSMUA_Achr6P22750_001	Banana	vacuole	47.23	45.96
GSMUA_Achr2P05330_001	Banana	vacuole	43.08	45.42
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	45.26	44.9
GSMUA_Achr7P02160_001	Banana	vacuole	45.06	44.71
GSMUA_Achr8P25280_001	Banana	endoplasmic reticulum, extracellular, vacuole	41.5	43.75
GSMUA_Achr4P08520_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.25	40.0
GSMUA_Achr2P03770_001	Banana	vacuole	47.83	39.74
GSMUA_Achr4P12980_001	Banana	extracellular, vacuole	41.3	25.64

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
EnsemblPlantsGene:GSMUA_Achr11G05440_001	EnsemblPlants:GSMUA_Achr11P05440_001	EnsemblPlants:GSMUA_Achr11T05440_001	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	UniProt:M0RPM4	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698	PANTHER:PTHR22298
PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000294F7A6	SEG:seg	:

Description

Endoglucanase 17 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05440_001]

Coordinates

chr11:+:4052585..4054831

Molecular Weight (calculated)

55250.2 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.269

Length

506 amino acids

Sequence
(BLAST)

001: MAHSRPSFLL LSHFLLSLFA SGAIGSPGHH GPANHNYRDA LSKSILFFEG QRSGRLPANQ RMTWRRNSGL SDGSAMNASA LDFVDLVGGY YDAGDNVKFG
101: FPMAFTTTML SWSVIEFGGM MKGELENARA AVRWATDYLL KATAHPNTIY VQVGDPNKDH ACWERPEDMD TPRTVYKVDN SNPGSDVAAE TAAALAAASL
201: VFRKSDPAYS KLLRNRAISV FEFADKYRGS YSNGLKNVVC PFYCSYSGYQ DELLWGAAWL HKATKNPTYL NYIEANGQTL GADESDNTFG WDNKHVGARI
301: LLSKAFLVQN LKSLHDYKGH ADNFICSLIP GTPFSQTQYT PGGLLFKMGD SNMQYVTSTS FLLVAYAKFL TYSSKVVSCG GTTVTPRKLR SIAKRQVDYI
401: LGDNPQKMSY MVGYGARYPQ QVHHRGSSLP SVAAHPAKIP CSAGFTALYT SAPNPNPLTG AVVGGPDAMD RFPDQRSDYA RSEPATYINA PLVGALAYLA
501: HSSGQL

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.