Factsheet for VIT_07s0005g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
extracellular 5
golgi 3
plasma membrane 4
endoplasmic reticulum 3
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31855	Soybean	nucleus	82.39	83.37
KRH69273	Soybean	extracellular, vacuole	81.6	82.25
KRH68213	Soybean	nucleus	80.23	82.0
KRG96467	Soybean	extracellular, vacuole	66.14	81.25
PGSC0003DMT400081314	Potato	extracellular	77.89	79.6
GSMUA_Achr11P...	Banana	extracellular, vacuole	77.69	78.46
Solyc09g075360.2.1	Tomato	plastid	78.28	78.43
CDX97262	Canola	vacuole	78.08	77.63
Bra018559.1-P	Field mustard	extracellular, vacuole	77.89	77.43
AT4G02290.1	Thale cress	plastid	77.89	77.13
CDY22043	Canola	extracellular, vacuole	77.69	76.64
Bra036281.1-P	Field mustard	extracellular, vacuole	77.5	76.45
CDY52780	Canola	extracellular, vacuole	77.1	76.06
AT1G02800.1	Thale cress	extracellular, vacuole	71.82	73.25
CDY32480	Canola	extracellular, vacuole	72.41	72.27
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	69.67	71.63
Bra032584.1-P	Field mustard	extracellular, vacuole	72.41	71.57
CDY37459	Canola	endoplasmic reticulum, extracellular	71.23	71.37
Os01t0312800-01	Rice	extracellular	69.67	71.34
TraesCS1D01G365100.1	Wheat	extracellular, vacuole	69.47	71.29
EES00659	Sorghum	vacuole	68.69	70.06
CDY01915	Canola	cytosol	48.92	68.87
Zm00001d009097_P001	Maize	extracellular	69.67	68.46
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	69.47	67.75
TraesCS1A01G360700.3	Wheat	extracellular, vacuole	69.28	67.17
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	60.27	62.47
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	55.77	57.58
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	54.6	56.48
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	50.49	51.7
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	46.58	49.58
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	46.18	48.86
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	46.38	47.12
VIT_04s0008g02020.t01	Wine grape	vacuole	44.23	46.5
VIT_04s0008g02010.t01	Wine grape	vacuole	44.42	46.42
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	45.99	46.08
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	44.42	43.57
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	50.1	40.7
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	44.62	37.07

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100232904	wikigene:100232904	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	ProteinID:AAK81879	ProteinID:AAK81879.1	EMBL:AY043236	ProteinID:CCB59980	ProteinID:CCB59980.1
UniProt:F6HZ65	EMBL:FN596502	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:Glyco_hydro_9_His_AS
InterPro:IPR012341	EntrezGene:LOC100232904	wikigene:LOC100232904	PFAM:PF00759	ScanProsite:PS00592	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF55	SUPFAM:SSF48208	TIGR:TC61627	UniParc:UPI00015CAE33	ArrayExpress:VIT_07s0005g00740
EnsemblPlantsGene:VIT_07s0005g00740	EnsemblPlants:VIT_07s0005g00740.t01	unigene:Vvi.12	RefSeq:XP_002271736	RefSeq:XP_002271736.1	SEG:seg

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:F6HZ65]

Coordinates

chr7:+:3376236..3378831

Molecular Weight (calculated)

56962.7 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.258

Length

511 amino acids

Sequence
(BLAST)

001: MALYPVSAYS SFSSSSTLLI LLCFFTSSLL LCNAFQHHHH PRVARHNYRD ALTKSILFFE GQRSGRLPSN QRMTWRRDSG LSDGAAMHVD LVGGYYDAGD
101: NVKFGFPMAF TTTMLSWSVI EFGGLMKGEL QHAKEAIRWA TDYLLKATVH PDTIYVQVGD ANKDHACWER PEDMDTSRSV FKVDRNTPGS DVAAETAAAL
201: AAASVVFRRS DPTYSKLLIR RAIRVFQFAD RYRGAYSNGL KNYVCPFYCS YSGYQDELLW GAAWLHKATR NPTFLSYIQV NGQTLGADDS DNTFGWDNKH
301: VGARILLSKA FLLQRVQSLH DYKGHADNFI CSLVPGTPFS QAQYTPGGLL FKMSDSNMQY VTSTSFLLVT YAKYLTSAHK VVNCGGTIIT PKRLRVIAKK
401: QVDYLLGDNP LKMSYMVGYG PRYPQRIHHR GSSLPSIAKH PAKIQCSAGF NIMHSQSPNP NILVGAVVGG PDQHDRFPDQ RSDFEQSEPS TYTNAPLVGA
501: LTYLAHSFGQ L

Best Arabidopsis Sequence Match ( AT4G02290.1 )
(BLAST)

001: MALLLVSSSS SYALRVTIFL SFFFFLCNGF SYPTTSSLFN THHHRHHLAK HNYKDALTKS ILFFEGQRSG KLPSNQRMSW RRDSGLSDGS ALHVDLVGGY
101: YDAGDNIKFG FPMAFTTTML SWSVIEFGGL MKSELQNAKI AIRWATDYLL KATSQPDTIY VQVGDANKDH SCWERPEDMD TVRSVFKVDK NIPGSDVAAE
201: TAAALAAAAI VFRKSDPSYS KVLLKRAISV FAFADKYRGT YSAGLKPDVC PFYCSYSGYQ DELLWGAAWL QKATKNIKYL NYIKINGQIL GAAEYDNTFG
301: WDNKHAGARI LLTKAFLVQN VKTLHEYKGH ADNFICSVIP GAPFSSTQYT PGGLLFKMAD ANMQYVTSTS FLLLTYAKYL TSAKTVVHCG GSVYTPGRLR
401: SIAKRQVDYL LGDNPLRMSY MVGYGPKFPR RIHHRGSSLP CVASHPAKIQ CHQGFAIMNS QSPNPNFLVG AVVGGPDQHD RFPDERSDYE QSEPATYINS
501: PLVGALAYFA HAYGQL

Arabidopsis Description

AtGH9B13Endoglucanase 17 [Source:UniProtKB/Swiss-Prot;Acc:O81416]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.