Factsheet for VIT_03s0038g00630.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60771	Soybean	extracellular, vacuole	79.19	79.84
KRH51463	Soybean	extracellular	78.38	78.54
KRH29353	Soybean	extracellular, vacuole	76.77	75.7
Solyc01g110340.2.1	Tomato	extracellular, vacuole	75.35	75.2
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	74.95	74.95
GSMUA_Achr1P07760_001	Banana	vacuole	73.13	72.26
Bra011881.1-P	Field mustard	cytosol	69.09	72.0
CDY42599	Canola	cytosol	68.69	71.58
AT4G39010.1	Thale cress	extracellular, vacuole	70.71	70.42
GSMUA_Achr2P03400_001	Banana	extracellular	69.9	69.34
CDY41955	Canola	extracellular, vacuole	69.29	69.29
TraesCS5A01G317400.1	Wheat	plastid	70.51	68.43
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	60.81	68.41
TraesCS5B01G318000.1	Wheat	vacuole	69.9	67.45
HORVU5Hr1G081200.5	Barley	vacuole	70.1	67.38
Os09t0530200-01	Rice	mitochondrion	68.48	65.83
Zm00001d021280_P004	Maize	vacuole	71.11	64.0
TraesCS5D01G323700.2	Wheat	vacuole	70.51	63.45
OQU89810	Sorghum	extracellular, plastid, vacuole	71.52	63.33
CDY22399	Canola	extracellular	57.17	57.52
Bra033592.1-P	Field mustard	extracellular	57.17	57.52
CDX72723	Canola	extracellular	56.77	57.11
AT4G39000.1	Thale cress	extracellular, vacuole	56.77	57.0
CDY22400	Canola	extracellular, vacuole	53.13	56.56
Bra011882.1-P	Field mustard	extracellular	56.16	56.5
VIT_02s0025g02650.t01	Wine grape	endoplasmic reticulum, extracellular	56.16	56.39
Bra033591.1-P	Field mustard	extracellular, vacuole	55.76	56.33
CDY41954	Canola	vacuole	53.13	56.32
VIT_07s0005g00740.t01	Wine grape	plastid	57.58	55.77
CDY42597	Canola	extracellular	52.32	55.46
VIT_18s0089g00210.t01	Wine grape	extracellular, vacuole	53.54	53.64
VIT_16s0022g00750.t01	Wine grape	extracellular, vacuole	53.94	53.51
VIT_13s0067g01190.t01	Wine grape	extracellular, vacuole	44.65	45.76
VIT_13s0067g01200.t01	Wine grape	extracellular, vacuole	43.84	45.21
VIT_04s0008g02010.t01	Wine grape	vacuole	44.24	44.79
VIT_02s0025g00430.t01	Wine grape	extracellular, vacuole	45.45	44.73
VIT_19s0090g01050.t01	Wine grape	extracellular, vacuole	44.65	43.33
VIT_04s0008g02020.t01	Wine grape	vacuole	42.22	43.0
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	42.63	40.5
VIT_02s0025g01380.t01	Wine grape	extracellular, vacuole	47.68	37.52
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	42.42	34.15

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	EntrezGene:100260645	wikigene:100260645	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	EMBL:AM478628	ProteinID:CAN70805	ProteinID:CAN70805.1	ProteinID:CCB60707	ProteinID:CCB60707.1
UniProt:F6I191	EMBL:FN596508	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341
EntrezGene:LOC100260645	wikigene:LOC100260645	PFAM:PF00759	ScanProsite:PS00698	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29
SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI00015C8AB5	ArrayExpress:VIT_03s0038g00630	EnsemblPlantsGene:VIT_03s0038g00630	EnsemblPlants:VIT_03s0038g00630.t01
RefSeq:XP_002275280	RefSeq:XP_002275280.1	SEG:seg	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:F6I191]

Coordinates

chr3:+:565597..568081

Molecular Weight (calculated)

54622.7 Da

IEP (calculated)

4.554

GRAVY (calculated)

-0.299

Length

495 amino acids

Sequence
(BLAST)

001: MPIPRTVFLI SLLLLILRLP RFESANHDYS DALSKCILFF EGQRSGFLPN GQRISWRANS GLSDGWQRSV DLTGGYYDAG DNIKFGFPMA FTTTMLAWSV
101: IEFGDSMPAG ELRNTMVAIR WATDYLLKTV SQPGRIFVQV GDPIIDHNCW ERPEDMDTAR TVYAVEAPNP ASDVAGETAA AFAASSMAFR SSDPGYSETL
201: LRNAISVFQY ADNYRGAYSD NADIRDGVCP FYCDFDGYQD ELLWGAAWLR RASQDDSYLN YIENNGKTLG AEDNINEFGW DNKHAGLNVL VSKEFLEGSM
301: YSLQSYKASA DSFMCTLIPE SSSSHIEYSP GGLIYKPGGS NLQHATSIAF LLLSYANYLA RSGQSVNCGN ISIGPSSLRQ QAKRQIDYIL GDNPMGMSYM
401: VGYSNYFPQR IHHRGSSLPS IKDHPEFIAC KEGSAYFNSS NPNPNILVGA VVGGPGDDDS YEDDRDDFRK SEPTTYINAP LVGALAYFVA NPNPS

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.