Factsheet for Bra033592.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22399	Canola	extracellular	100.0	100.0
Bra011882.1-P	Field mustard	extracellular	82.52	82.52
AT4G39000.1	Thale cress	extracellular, vacuole	80.49	80.32
Bra033591.1-P	Field mustard	extracellular, vacuole	69.72	70.0
Bra011881.1-P	Field mustard	cytosol	59.15	61.26
KRH51463	Soybean	extracellular	57.52	57.29
Solyc01g110340.2.1	Tomato	extracellular, vacuole	57.72	57.26
KRH60771	Soybean	extracellular, vacuole	57.11	57.23
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	57.52	57.17
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	57.11	56.77
KRH29353	Soybean	extracellular, vacuole	56.91	55.78
GSMUA_Achr1P07760_001	Banana	vacuole	55.28	54.29
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	48.37	54.09
GSMUA_Achr2P03400_001	Banana	extracellular	53.86	53.11
TraesCS5A01G317400.1	Wheat	plastid	53.86	51.96
Bra024571.1-P	Field mustard	extracellular	52.03	51.82
Bra003946.1-P	Field mustard	extracellular	51.22	51.64
TraesCS5B01G318000.1	Wheat	vacuole	53.46	51.27
Bra016192.1-P	Field mustard	extracellular, vacuole	51.83	51.1
HORVU5Hr1G081200.5	Barley	vacuole	53.46	51.07
Os09t0530200-01	Rice	mitochondrion	52.64	50.29
Bra012349.1-P	Field mustard	extracellular, plastid, vacuole	48.17	49.07
Bra032584.1-P	Field mustard	extracellular, vacuole	51.42	48.94
Zm00001d021280_P004	Maize	vacuole	54.27	48.55
Bra018559.1-P	Field mustard	extracellular, vacuole	50.61	48.44
TraesCS5D01G323700.2	Wheat	vacuole	54.06	48.36
Bra036281.1-P	Field mustard	extracellular, vacuole	50.41	47.88
OQU89810	Sorghum	extracellular, plastid, vacuole	54.27	47.76
Bra007983.1-P	Field mustard	extracellular	46.54	47.41
Bra007982.1-P	Field mustard	extracellular	45.73	46.49
Bra016143.1-P	Field mustard	extracellular, plastid, vacuole	45.53	46.28
Bra019296.1-P	Field mustard	extracellular, vacuole	44.72	45.83
Bra004846.1-P	Field mustard	nucleus	43.29	45.32
Bra000354.1-P	Field mustard	extracellular, plastid, vacuole	43.29	44.75
Bra013709.1-P	Field mustard	extracellular	43.5	44.58
Bra004845.1-P	Field mustard	extracellular	43.7	43.97
Bra034983.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	39.43	43.89
Bra019455.1-P	Field mustard	golgi, vacuole	42.68	43.21
Bra004844.1-P	Field mustard	extracellular, vacuole	42.48	42.74
Bra005536.1-P	Field mustard	vacuole	44.92	42.34
Bra021821.1-P	Field mustard	vacuole	43.29	41.85
Bra032270.1-P	Field mustard	extracellular	46.14	37.27
Bra027735.1-P	Field mustard	extracellular, vacuole	45.33	35.97
Bra027699.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.12	35.75
Bra018765.1-P	Field mustard	vacuole	45.33	35.74

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra033592
EnsemblPlants:Bra033592.1	EnsemblPlants:Bra033592.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_9	InterPro:IPR012341	UniProt:M4EXQ5
PFAM:PF00759	PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	UniParc:UPI000253F8ED
SEG:seg	:	:	:	:	:

Description

AT4G39000 (E=6e-226) AtGH9B17 | AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA06:+:26084502..26086699

Molecular Weight (calculated)

54875.0 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.284

Length

492 amino acids

Sequence
(BLAST)

001: MKPSFFILTV LALLLLPTAI PHDYSEALRK SILFFEGQRS GRLPKQQRMT WRGDSALKDG KNLNTDLVGG YYDAGDNIKF HFPMAFTATM LAWSSIDFQS
101: YMSQNDVGHN LIALKWATDY LLKTVSQLPN RIFVQVGEAQ ADHNCWERPE DMDTPRTAFA LDAPGPASDL AGEIAAALAA ASIAFKQSRP KYSEVLLDKA
201: IKTFQYADSH RGCYTDNPNV HNAVCPFYCS VNGYKDELLW GAAWLRRATG NDYYLEYLVN NRQAFGQDFN YLEFGWDNKY GGVNVLIAKE IFEKGAIALT
301: AYKDAAEEMM CAFFPETSGP HHMSYTPGGL LYKPGNSQLQ NMAALSFLIL TYADYLSKSS QQLNCGNHQF QPDSLRRIVK RQVDYILGDN PAKLSYMVGY
401: GDQYPRQIHH RGASIPSIKV QRNAFGCLKG WDIFASPNPD PNILVGAVIG GPDVDDSFIG KRTNASDTEP TTYINAPLVG VFAYFKSNPN FS

Best Arabidopsis Sequence Match ( AT4G39000.1 )
(BLAST)

001: MKASIYLVTV FILLLLLLPT AIPHDYSDAL RKSILFFEGQ RSGRLPKQQR MAWRRNSALN DGKNLKTDLV GGYYDAGDNV KFHFPMAFTA TMLAWSSVDF
101: GRYMSQHDFR HNLVAVKWAT DYLLKTVSQL PNRIFVHVGE VQPDHDCWER PEDMDTPRTA FALDAPYPAS DLAGEIAAAL AAASIAFKQA NPKYSAILLN
201: KAVQTFQYAD SHRGSYTDNP GIKQAVCPFY CSVNGYKDEL LWGAAWLRRA TGEDSYLRYL VDNGQAFGES SNYFEFGWDN KVGGVNVLVA KEVLQNNVTA
301: IAAYKDTAEK MMCSFLPETN GPHMSYTPGG LIYKPGSTQL QNTAALSFLL LTYADYLSTS SQQLNCGNLK FQPDSLRRIV KRQVDYVLGD NPMKLSYMIG
401: YGERYPGLIH HRGSSIPSVT VHPAAFGCIA GWNIFSSPNP NPNILIGAVI GGPDVDDRFI GGRTNASETE PTTYINAPFV GVFAYFKSNP NFS

Arabidopsis Description

AtGH9B17Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.