Factsheet for Solyc01g110340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008105	Potato	endoplasmic reticulum, extracellular, vacuole	95.97	96.16
KRH60771	Soybean	extracellular, vacuole	74.8	75.56
VIT_03s0038g00630.t01	Wine grape	extracellular, vacuole	75.2	75.35
KRH51463	Soybean	extracellular	74.4	74.7
KRH29353	Soybean	extracellular, vacuole	74.4	73.51
CDY42599	Canola	cytosol	67.94	70.95
Bra011881.1-P	Field mustard	cytosol	67.94	70.95
CDY41955	Canola	extracellular, vacuole	68.75	68.89
AT4G39010.1	Thale cress	extracellular, vacuole	68.35	68.21
GSMUA_Achr1P07760_001	Banana	vacuole	67.34	66.67
GSMUA_Achr2P03400_001	Banana	extracellular	66.33	65.93
GSMUA_Achr9P20920_001	Banana	extracellular, vacuole	57.66	65.0
TraesCS5A01G317400.1	Wheat	plastid	64.31	62.55
TraesCS5B01G318000.1	Wheat	vacuole	64.52	62.38
HORVU5Hr1G081200.5	Barley	vacuole	64.72	62.33
Os09t0530200-01	Rice	mitochondrion	64.11	61.75
Zm00001d021280_P004	Maize	vacuole	65.93	59.45
OQU89810	Sorghum	extracellular, plastid, vacuole	66.13	58.68
Solyc09g010210.2.1	Tomato	plastid	57.66	58.49
TraesCS5D01G323700.2	Wheat	vacuole	64.72	58.36
CDY22400	Canola	extracellular, vacuole	54.44	58.06
CDY22399	Canola	extracellular	57.26	57.72
Bra033592.1-P	Field mustard	extracellular	57.26	57.72
AT4G39000.1	Thale cress	extracellular, vacuole	57.06	57.4
CDY41954	Canola	vacuole	54.03	57.39
CDX72723	Canola	extracellular	56.85	57.32
CDY42597	Canola	extracellular	53.63	56.96
Bra011882.1-P	Field mustard	extracellular	56.45	56.91
Bra033591.1-P	Field mustard	extracellular, vacuole	56.05	56.73
Solyc08g083210.2.1	Tomato	extracellular, vacuole	54.64	54.53
Solyc11g040340.1.1	Tomato	extracellular, vacuole	51.01	52.82
Solyc09g075360.2.1	Tomato	plastid	53.63	52.16
Solyc03g083820.1.1	Tomato	plastid	49.4	49.2
Solyc05g052530.1.1	Tomato	extracellular	46.98	47.94
Solyc08g081620.2.1	Tomato	extracellular	45.97	45.51
Solyc06g066120.2.1	Tomato	extracellular, vacuole	43.15	44.03
Solyc07g049300.2.1	Tomato	extracellular, vacuole	43.15	42.54
Solyc07g064870.2.1	Tomato	mitochondrion	42.34	39.4
Solyc08g082250.2.1	Tomato	extracellular	45.77	36.32
Solyc02g014220.2.1	Tomato	extracellular	43.35	34.02
Solyc12g055970.1.1	Tomato	cytosol, nucleus	27.02	29.0

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0000272
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0030245
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_Asp/Glu_AS	InterPro:IPR012341	UniProt:K4B3P7	PFAM:PF00759	ScanProsite:PS00698
PANTHER:PTHR22298	PANTHER:PTHR22298:SF29	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g110340.2	EnsemblPlants:Solyc01g110340.2.1
UniParc:UPI0002768FA0	SEG:seg	:	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:K4B3P7]

Coordinates

chr1:+:97070244..97076388

Molecular Weight (calculated)

55215.8 Da

IEP (calculated)

4.715

GRAVY (calculated)

-0.319

Length

496 amino acids

Sequence
(BLAST)

001: MKRNIISSKL MLLLLLLLPL LNCHGSYLDY TEALTKSILF FEGQRSGYLP QDQRMSWRGH SGLSDGWEMN VDLTGGYYDA GDNVKFNFPM AFTTTLLAWS
101: VIEFGEIMPP AELRNGLVAI RWSTDYLLKT VSQPDRIFVQ VGDPVLDHDC WERPEDMDTA RTVYTVDAPN PASDVAGETA AALAAASIAF RPSDPGYAET
201: LLRTSTRVFD FADRNRGAYS DNNNIREGVC PYYCDFDGYQ DELLWGAAWL RRATQRDDYL SYIQENRQTL GADDNINEFG WDNKHAGVNV LVSKEVLDGT
301: TYSLQSYKAS ADSFMCTLIP ESSSSHIQYS PGGLIYKPGG SNLQHATTIT FLLLVYANYL EKSSQILNCG TISVSPSMLR KIGKRQVDYI LGENPKGISY
401: MVGYSNYYPQ KIHHRGSTIP SIKDHPQVIG CNEGSIYFNS SQPNPNVLVG AIVGGPGEDD VYDDNRDEFR KSEPTTYINA PFVGALAYFA ANPNVN

Best Arabidopsis Sequence Match ( AT4G39010.1 )
(BLAST)

001: MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
101: VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
201: TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
301: NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
401: YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS

Arabidopsis Description

AtGH9B18Endoglucanase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q93YQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.