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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400051238 Potato extracellular 97.94 97.94
VIT_01s0011g02170.t01 Wine grape endoplasmic reticulum, extracellular 71.04 73.01
KRH24186 Soybean extracellular, vacuole 70.25 70.59
CDY60076 Canola extracellular 26.74 69.83
KRH29156 Soybean extracellular, vacuole 69.15 69.7
Bra018765.1-P Field mustard vacuole 66.61 67.47
Bra032270.1-P Field mustard extracellular 64.87 67.32
CDX93707 Canola vacuole 66.46 67.31
CDY60075 Canola vacuole 66.3 66.93
CDY59895 Canola cytosol, vacuole 53.64 66.86
CDY65179 Canola extracellular 66.14 66.77
AT1G48930.1 Thale cress vacuole 65.82 66.35
GSMUA_Achr2P03770_001 Banana vacuole 59.65 61.9
Os04t0674800-01 Rice extracellular 55.7 56.32
EES13091 Sorghum vacuole 55.38 55.56
Zm00001d026605_P001 Maize vacuole 54.75 55.36
Solyc07g049300.2.1 Tomato extracellular, vacuole 43.35 54.47
TraesCS2D01G557500.1 Wheat extracellular 53.01 54.3
TraesCS2B01G586600.1 Wheat extracellular 52.53 54.07
HORVU2Hr1G120100.1 Barley extracellular 52.53 53.9
TraesCS2A01G556300.1 Wheat vacuole 53.32 52.25
Solyc05g052530.1.1 Tomato extracellular 39.72 51.65
Solyc07g064870.2.1 Tomato mitochondrion 42.25 50.09
Solyc08g082250.2.1 Tomato extracellular 49.53 50.08
Solyc09g010210.2.1 Tomato plastid 35.92 46.42
Solyc08g081620.2.1 Tomato extracellular 35.92 45.31
Solyc11g040340.1.1 Tomato extracellular, vacuole 34.18 45.09
Solyc08g083210.2.1 Tomato extracellular, vacuole 35.13 44.67
Solyc06g066120.2.1 Tomato extracellular, vacuole 34.02 44.24
Solyc12g055970.1.1 Tomato cytosol, nucleus 31.96 43.72
Solyc01g110340.2.1 Tomato extracellular, vacuole 34.02 43.35
Solyc03g083820.1.1 Tomato plastid 33.54 42.57
Solyc09g075360.2.1 Tomato plastid 33.7 41.76
Protein Annotations
KEGG:00500+3.2.1.4Gene3D:1.50.10.10MapMan:35.1InterPro:6-hairpin_glycosidase_sfInterPro:6hp_glycosidase-like_sfInterPro:CBM_49
GO:GO:0000272GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0008810GO:GO:0009056GO:GO:0009987GO:GO:0016787
GO:GO:0016798GO:GO:0030245GO:GO:0030246InterPro:Glyco_hydro_9InterPro:Glyco_hydro_9_His_ASInterPro:IPR012341
UniProt:K4B4M1PFAM:PF00759PFAM:PF09478ScanProsite:PS00592PANTHER:PTHR22298PANTHER:PTHR22298:SF41
SMART:SM01063SUPFAM:SSF48208SignalP:SignalP-noTMEnsemblPlantsGene:Solyc02g014220.2EnsemblPlants:Solyc02g014220.2.1UniParc:UPI000276825B
SEG:seg:::::
Description
Endoglucanase [Source:UniProtKB/TrEMBL;Acc:K4B4M1]
Coordinates
chr2:+:15487111..15490896
Molecular Weight (calculated)
69867.7 Da
IEP (calculated)
7.874
GRAVY (calculated)
-0.226
Length
632 amino acids
Sequence
(BLAST)
001: MGISSKLQLI SVLLVGLLAL EAVSYNFDYG NAMDKTLLFF EAQRSGKLPP NQRVKWRGDS GLKDGFLQGV NLVGGYYDAG DHVKFGLPMA YSLTMLGWSV
101: VDYRKEIADV NQMGNTLAAI KWGTDYFIKA HTQPNVLWAQ VGDGDSDHYC WERAEDMTTP RTAYKLDPSH PGSDLAGEAA AAFAAASLAF KPYDSSYSNL
201: LLVHAKQLFS FADTFRGLYD DSIPNAQAFY TSSGYSDELL WAAAWLYRAT YDEFYLKYVV DNAVSLGGTG WAVREFSWDN KYAGVQILLT KILLDGAGGS
301: YTPTLKQYQA KADYFTCACL QKNDGYNVAL TPGGLIYVRE WNNLQYASSA AFLLSMYSDY LSEKKIVLQC PEGQVQPSDV LSFAKSQADY ILGKNPKAIS
401: YLVGYGQNYP IHVHHRGASI APISVLHTAV SCIEGFETWY RRPQANPNII HGALLGGPSK TDDFSDDRSN YEQTEPTLSG SAPLIGLFVK LQSLSGYRGS
501: YRHISPTPYQ KPPASYHPQP STPYYKAPGS SNYKAPGAPV TFLHSIISTW TIGPTTYYKH RVVVKNTSQK PITNLKLIIE NLSGSLWGLS PCPEKNIYEL
601: PQWIKILKPG SELTFVYVQG GAQAKVSIKS YH
Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)
001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN
Arabidopsis Description
AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.