Factsheet for TraesCS2B01G586600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G120100.1	Barley	extracellular	94.63	94.32
TraesCS2D01G557500.1	Wheat	extracellular	94.46	94.0
TraesCS2A01G556300.1	Wheat	vacuole	95.44	90.85
Os04t0674800-01	Rice	extracellular	75.9	74.56
Zm00001d026605_P001	Maize	vacuole	75.41	74.08
EES13091	Sorghum	vacuole	75.57	73.65
GSMUA_Achr2P03770_001	Banana	vacuole	59.77	60.26
CDY60076	Canola	extracellular	21.82	55.37
VIT_01s0011g02170.t01	Wine grape	endoplasmic reticulum, extracellular	54.56	54.47
KRH24186	Soybean	extracellular, vacuole	55.7	54.37
Bra032270.1-P	Field mustard	extracellular	53.09	53.53
KRH29156	Soybean	extracellular, vacuole	54.56	53.43
Solyc02g014220.2.1	Tomato	extracellular	54.07	52.53
CDY60075	Canola	vacuole	53.26	52.24
PGSC0003DMT400051238	Potato	extracellular	53.75	52.22
CDY65179	Canola	extracellular	53.09	52.08
CDY59895	Canola	cytosol, vacuole	42.83	51.87
Bra018765.1-P	Field mustard	vacuole	52.61	51.76
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.46	51.61
CDX93707	Canola	vacuole	52.44	51.6
AT1G48930.1	Thale cress	vacuole	52.28	51.2
TraesCS7B01G104600.1	Wheat	vacuole	44.14	50.84
TraesCS5B01G201100.1	Wheat	vacuole	44.3	50.46
TraesCS6B01G342600.1	Wheat	vacuole	43.65	50.28
TraesCS7B01G046900.1	Wheat	vacuole	42.35	50.19
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	41.69	49.71
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	38.44	48.16
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	38.6	47.69
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.6	47.69
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	47.88	47.42
TraesCS5B01G169500.1	Wheat	unclear	38.44	47.29
TraesCS7B01G219100.1	Wheat	extracellular	37.95	47.17
TraesCS6B01G325400.1	Wheat	extracellular	37.3	46.17
TraesCS5B01G318000.1	Wheat	vacuole	36.97	44.25
TraesCS6B01G122000.1	Wheat	vacuole	29.32	43.9
TraesCS7B01G111700.1	Wheat	extracellular	37.62	43.75
TraesCS2B01G327200.1	Wheat	nucleus	36.16	43.7
TraesCS1B01G107700.1	Wheat	extracellular	35.34	42.89
TraesCS6B01G368000.1	Wheat	extracellular	34.2	42.08

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	InterPro:CBM_49
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0030246	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341
PFAM:PF00759	PFAM:PF09478	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF41	SMART:SM01063
SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2B01G586600	EnsemblPlants:TraesCS2B01G586600.1	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:773168809..773170818

Molecular Weight (calculated)

66885.5 Da

IEP (calculated)

5.225

GRAVY (calculated)

-0.155

Length

614 amino acids

Sequence
(BLAST)

001: MARLTIASAA VALILLVASA EASPAWSDYA GAFDKSLQFF EAQRSGKLPT DRTVHWRGDS ALTDGFSQGV DLVGGYYDAG DHVKFGFPAA YAVTMLSWGV
101: LEFEKEMVAA NSLNRALDAI RWGTNYFIKA HTEPNTLWVQ VGDGDSDHLC WERAEDMSTP RTASKIDASR PGSEVAAETA AALAAAAKVF RHYDSMYADL
201: LLMHAKQIFT FADTFRGRYD DSLQCAKKFY PSASGYQDEL LWGAAWLYEA TGDEDYLDYV ARNAEAFGGT GWAVREFSWD NKYAGVQVLL SKVLLAAGGD
301: GDYADTLKQF RAKAEFFMCA CIQKNGGNNV RTTPGGLLYV ADWNNMQYVS SSVFLLTVYA DYLAETGDKL RCPDGEVAPA EIVAFARSQV DYVLGKNPLS
401: MSYMVGHGDK FPTHVHHRGA SIPSVYAVND TVGCMEGFDA YYNSKGADPN VLVGALVGGP DGHDGFVDDR CNYQRAEPTL AAAAPMCGVF ARLAAEPAAA
501: GNSPGYQLPQ DTLHVGGTPL EFVHTVTHTW KTNGVDYYRH VVTAKHACAH PITYLRLRIQ GLTGPIYGVS ATHDKEMYGF PSWLTRLDVD DKLTIVYIQE
601: GPAAKITVAE YKTG

Best Arabidopsis Sequence Match ( AT1G48930.1 )
(BLAST)

001: MRKFGGSLFG VSLLLSVLLA AATAAAEYYN YGSALDKTFL FFEAQRSGKL PAAQRVKWRG PSGLKDGLAQ GVSLEGGYYD AGDHVKFGLP MAFAVTMLSW
101: AAVDNRKELS SSNQMQQTLW SIRWGTDYFI KAHPQPNVLW GQVGDGESDH YCWERPEDMT TSRTAYKLDP YHPGSDLAGE TAAALAAASL AFKPFNSSYS
201: ALLLSHAKEL FSFADKYRGL YTNSIPNAKA FYMSSGYSDE LLWAAAWLHR ATGDQYYLKY AMDNSGYMGG TGWGVKEFSW DNKYAGVQIL LSKILLEGKG
301: GIYTSTLKQY QTKADYFACA CLKKNGGYNI QTTPGGLMYV REWNNLQYAS AAAYLLAVYS DYLSAANAKL NCPDGLVQPQ GLLDFARSQA DYILGKNRQG
401: MSYVVGYGPK YPIRVHHRGS SIPSIFAQRS SVSCVQGFDS WYRRSQGDPN VIYGALVGGP DENDNYSDDR SNYEQSEPTL SGTAPLVGLF AKLYGGSLGS
501: YGGGSYKPYE TTKPAASSYK ATPTTYSPKQ SGAQIEFLHS ITSNWIAGNT RYYRHKVIIK NNSQKPISDL KLKIEDLSGP IWGLNPTGQK YTYQLPQWQK
601: TLRAGQAYDF VYVQGGPQAK VSVLSYN

Arabidopsis Description

AtGH9C1Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.