Factsheet for TraesCS6B01G342600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G291800.1	Wheat	vacuole	97.19	95.22
TraesCS6A01G312400.1	Wheat	vacuole	94.75	93.69
Zm00001d017978_P001	Maize	plasma membrane	84.24	82.69
Os02t0738600-01	Rice	mitochondrion	85.74	82.64
Zm00001d051814_P002	Maize	vacuole	80.68	80.83
TraesCS7B01G104600.1	Wheat	vacuole	78.8	78.8
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	66.23	68.54
TraesCS7B01G046900.1	Wheat	vacuole	66.23	68.15
Solyc07g049300.2.1	Tomato	extracellular, vacuole	61.91	65.61
PGSC0003DMT400001781	Potato	extracellular, vacuole	61.91	65.61
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	63.23	64.68
GSMUA_Achr7P02160_001	Banana	vacuole	60.79	63.53
Bra005536.1-P	Field mustard	vacuole	62.1	63.41
CDY17123	Canola	vacuole	62.1	63.41
CDY19428	Canola	vacuole	62.1	63.41
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	62.66	63.14
KRH14764	Soybean	cytosol, nucleus, vacuole	48.03	63.05
AT2G32990.1	Thale cress	extracellular, vacuole	61.91	62.86
CDY19174	Canola	vacuole	61.91	62.62
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	59.66	62.35
CDY23776	Canola	vacuole	61.16	61.98
KRH73374	Soybean	vacuole	60.6	61.64
TraesCS5B01G201100.1	Wheat	vacuole	62.29	61.6
Bra021821.1-P	Field mustard	vacuole	58.54	61.3
EES07289	Sorghum	mitochondrion	84.62	59.5
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	44.84	48.78
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.65	47.89
TraesCS7B01G219100.1	Wheat	extracellular	44.28	47.77
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	55.35	47.58
TraesCS5B01G169500.1	Wheat	unclear	44.47	47.49
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	43.53	46.68
TraesCS6B01G325400.1	Wheat	extracellular	42.59	45.77
TraesCS1B01G107700.1	Wheat	extracellular	42.03	44.27
TraesCS6B01G122000.1	Wheat	vacuole	33.77	43.9
TraesCS5B01G318000.1	Wheat	vacuole	42.21	43.86
TraesCS2B01G586600.1	Wheat	extracellular	50.28	43.65
TraesCS7B01G111700.1	Wheat	extracellular	42.78	43.18
TraesCS2B01G327200.1	Wheat	nucleus	40.9	42.91
TraesCS6B01G368000.1	Wheat	extracellular	39.77	42.48

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF52	SUPFAM:SSF48208	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6B01G342600	EnsemblPlants:TraesCS6B01G342600.1	SEG:seg

Description

No Description!

Coordinates

chr6B:-:603144916..603147998

Molecular Weight (calculated)

58575.7 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.349

Length

533 amino acids

Sequence
(BLAST)

001: MRSGGATAVI LSRRLGAVSL LVLLLIAAAA EGSKSGSGDG KAHNYEEALR KSLLYFEAQR SGRLPHGQRV PWRDHSGLTD GLEQGVDLVG GYYDAGDHVK
101: FGLPMAFTVT MLSWSMIEYG DDVAAAGELA HALEAIKWGT DYFIKAHTQP DELWAEVGDG DTDHYCWQRP EDMTTSRQAY KVDRDHPGSD VAGETAAAMA
201: AASMVFRKSN PHYAHLLLHH AQQLFEFADG YRGQYDSSIA EVKSYYASVS GYKDELLWAA LWLHRATGKA AYLDYVVHNA HDFGGTGWAI TEFSWDVKYA
301: GVQILAARLL LRGEHTAEQK RTLERYQAKA EHYVCACLGR NAAGGEDANV ERSPGGMLYI RQWNNMQYVT NAAFLLSTYA DYLAEAGVET VTCAGGETAG
401: AGEVAALARA QVDYVLGTNP RGVSYLVGYG AKYPARVHHR AASIVPYKHS KQFIGCSQGF DHWYGRRSSN PNVLVGAIVG GPDRSDRFRD NRENYMQTEA
501: CTYNTAPMVG MFAKLNRMAR EEREQRAATA AEM

Best Arabidopsis Sequence Match ( AT2G32990.1 )
(BLAST)

001: MTVMNHRHKQ CHFLLLLLIT VFSAALDGVS SETDVGGFDY GEALSKSLLY FEAQRSGRLP YNQRVTWRDH SGLTDGLEQG VDLVGGYHDA GDHVKFGLPM
101: AFTVTMLSWS VIEYGDSLAS TGELSHALEA IKWGTDYFIK AHTSPNVLWA EVGDGDTDHY CWQRPEDMTT SRRAFKIDEN NPGSDIAGET AAAMAAASIV
201: FRSTNPHYSH LLLHHAQQLF EFGDKYRGKY DESLKVVKSY YASVSGYMDE LLWGATWLYR ATDNEHYMSY VVDMAHQLGG LSWAMSEFSW DVKFAGVQLL
301: ASMLLKEEKH KQHSKVLQQY KSKADHYLCS ILNKNINGTN VQRTPAGLLY VRQWNNMQYV STASFLLTVY SDHLRKSNTD LECHEGTVTP DEMLGFAKSQ
401: IDYILGSNPM ETSYLVGYGP KYPIRVHHRG ASIASFKEHK GFIGCTQGYD NWYGRSEPNP SVLVGALVGG PDHQDDFDDR RGNYVQTEAC TYNTAPLVGV
501: FARLIELEEQ KLEEEDVSLV ATYKR

Arabidopsis Description

AtGH9B8Endoglucanase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48766]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.