Factsheet for TraesCS7B01G104600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	97.0	97.18
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	96.44	88.16
HORVU7Hr1G040680.3	Barley	vacuole	88.18	84.08
OQU76161	Sorghum	vacuole	69.42	83.9
Zm00001d044744_P001	Maize	extracellular, vacuole	82.36	81.0
Os06t0247900-01	Rice	cytosol	68.11	79.43
TraesCS6B01G342600.1	Wheat	vacuole	78.8	78.8
TraesCS7B01G047000.1	Wheat	extracellular, vacuole	66.79	69.13
TraesCS7B01G046900.1	Wheat	vacuole	66.98	68.92
PGSC0003DMT400001781	Potato	extracellular, vacuole	60.98	64.61
Solyc07g049300.2.1	Tomato	extracellular, vacuole	60.79	64.41
TraesCS6B01G150300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	62.85	63.33
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	61.54	62.96
GSMUA_Achr7P02160_001	Banana	vacuole	59.85	62.55
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	59.66	62.35
TraesCS5B01G201100.1	Wheat	vacuole	63.04	62.34
KRH14764	Soybean	cytosol, nucleus, vacuole	47.47	62.32
Bra005536.1-P	Field mustard	vacuole	60.41	61.69
CDY17123	Canola	vacuole	60.41	61.69
CDY19428	Canola	vacuole	60.41	61.69
KRH73374	Soybean	vacuole	60.41	61.45
AT2G32990.1	Thale cress	extracellular, vacuole	60.23	61.14
CDY19174	Canola	vacuole	60.41	61.1
CDY23776	Canola	vacuole	59.29	60.08
Bra021821.1-P	Field mustard	vacuole	56.85	59.53
TraesCS7B01G219100.1	Wheat	extracellular	44.84	48.38
TraesCS1B01G090700.1	Wheat	extracellular, vacuole	44.28	48.16
TraesCS4B01G104500.1	Wheat	extracellular, vacuole	55.53	47.74
TraesCS5B01G169600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.09	47.28
TraesCS5B01G169500.1	Wheat	unclear	44.09	47.09
TraesCS1B01G377100.1	Wheat	extracellular, vacuole	43.9	47.08
TraesCS6B01G325400.1	Wheat	extracellular	42.03	45.16
TraesCS1B01G107700.1	Wheat	extracellular	42.03	44.27
TraesCS2B01G586600.1	Wheat	extracellular	50.84	44.14
TraesCS6B01G122000.1	Wheat	vacuole	33.21	43.17
TraesCS2B01G327200.1	Wheat	nucleus	40.53	42.52
TraesCS5B01G318000.1	Wheat	vacuole	40.9	42.5
TraesCS7B01G111700.1	Wheat	extracellular	41.28	41.67
TraesCS6B01G368000.1	Wheat	extracellular	38.65	41.28

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298
PANTHER:PTHR22298:SF52	SUPFAM:SSF48208	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G104600	EnsemblPlants:TraesCS7B01G104600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:120586621..120589444

Molecular Weight (calculated)

58258.0 Da

IEP (calculated)

6.471

GRAVY (calculated)

-0.339

Length

533 amino acids

Sequence
(BLAST)

001: MRRSSGAGAW ALGVAVAAAA IFLAAEAAGA APVPHDYEQA LRKSLLYFEA QRSGRLPHGQ RVAWRDHSGL TDGLEQGVDL VGGYYDAGDH VKFGLPMAFT
101: VTMLSWSLLE YGGDVAAAGE LAHALESIKW GTDYFIKAHT KPDELWAEVG DGDTDHYCWQ RPEDMTTSRQ AYKVDRERPG SDVAGETAAA LAAASMAFRE
201: TNPHYAHLLL HHAQQLFEFA DKYRGKYDSS IAEVKSYYAS VSGYHDELLW AALWLHRATG RASYLDYVVD NAHEFGGTGW AITEFSWDVK YAGVQILATR
301: LLLRGDHEER HRATLEGYRA KAEHYVCACM GKNAAAEDNV ERSPGGMLYV RQWNNMQYVT SAAYLLSVYS GYLTEAGDGG AAVTCAGGGG SADAGEVFAH
401: ARAQVDYVLG SNPRGISYLV GYGAKFPARV HHRAASIVPY KDRKEFIGCA QGFDDWFGRK SANPNVVVGA IVGGPDRHDR FRDDRVNYMQ TEACTYNTAP
501: MVGMFAMLNR VARQQGPSPA TQRPESSRST AAE

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.