Factsheet for HORVU7Hr1G040680.3

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G104600.1	Wheat	vacuole	84.08	88.18
TraesCS7D01G201000.1	Wheat	extracellular, vacuole	83.54	87.78
OQU76161	Sorghum	vacuole	65.47	82.99
TraesCS7A01G197900.1	Wheat	extracellular, vacuole	83.18	79.76
Os06t0247900-01	Rice	cytosol	63.86	78.12
Zm00001d044744_P001	Maize	extracellular, vacuole	74.42	76.75
HORVU7Hr1G029660.1	Barley	extracellular, mitochondrion, vacuole	61.36	64.47
PGSC0003DMT400001781	Potato	extracellular, vacuole	56.89	63.22
Solyc07g049300.2.1	Tomato	extracellular, vacuole	56.71	63.02
HORVU7Hr1G029680.1	Barley	peroxisome, vacuole	61.54	63.0
HORVU0Hr1G023830.2	Barley	vacuole	61.36	61.69
KRH14764	Soybean	cytosol, nucleus, vacuole	44.72	61.58
Bra005536.1-P	Field mustard	vacuole	57.42	61.49
CDY19428	Canola	vacuole	57.42	61.49
CDY17123	Canola	vacuole	57.42	61.49
GSMUA_Achr7P02160_001	Banana	vacuole	55.99	61.37
VIT_12s0059g01250.t01	Wine grape	extracellular, vacuole	57.07	61.23
AT2G32990.1	Thale cress	extracellular, vacuole	57.07	60.76
CDY19174	Canola	vacuole	57.25	60.72
GSMUA_Achr8P22580_001	Banana	endoplasmic reticulum, golgi, mitochondrion, vacuole	55.1	60.39
HORVU5Hr1G060140.1	Barley	vacuole	62.43	60.38
CDY23776	Canola	vacuole	56.35	59.89
KRH73374	Soybean	vacuole	55.99	59.73
Bra021821.1-P	Field mustard	vacuole	54.2	59.53
HORVU6Hr1G022270.2	Barley	mitochondrion	56.17	57.4
HORVU6Hr1G022300.1	Barley	extracellular, mitochondrion, plastid, vacuole	11.63	48.51
HORVU1Hr1G015550.1	Barley	vacuole	41.68	47.55
HORVU7Hr1G075970.1	Barley	endoplasmic reticulum, extracellular, vacuole	40.97	46.26
HORVU5Hr1G052830.1	Barley	endoplasmic reticulum, extracellular	40.97	46.08
HORVU1Hr1G085830.2	Barley	vacuole	50.45	45.19
HORVU3Hr1G029470.2	Barley	endoplasmic reticulum, extracellular, vacuole	50.09	44.94
HORVU1Hr1G079980.3	Barley	extracellular, vacuole	40.97	43.7
HORVU2Hr1G120100.1	Barley	extracellular	47.59	43.18
HORVU6Hr1G073570.3	Barley	extracellular	38.28	43.06
HORVU7Hr1G041610.1	Barley	vacuole	37.75	42.03
HORVU2Hr1G077130.1	Barley	extracellular, vacuole	36.85	41.28
HORVU1Hr1G019520.1	Barley	golgi, mitochondrion, vacuole	39.18	41.09
HORVU5Hr1G081200.5	Barley	vacuole	37.75	40.97
HORVU6Hr1G081500.1	Barley	plastid	36.31	38.96

Protein Annotations

KEGG:00500+3.2.1.4	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	UniProt:A0A287W718
ncoils:Coil	GO:GO:0000272	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008810	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0016798	GO:GO:0030245	InterPro:Glyco_hydro_9	InterPro:Glyco_hydro_9_His_AS	EnsemblPlantsGene:HORVU7Hr1G040680	EnsemblPlants:HORVU7Hr1G040680.3
InterPro:IPR012341	PFAM:PF00759	ScanProsite:PS00592	PANTHER:PTHR22298	PANTHER:PTHR22298:SF52	SUPFAM:SSF48208
UniParc:UPI000B476A7D	SEG:seg	:	:	:	:

Description

Endoglucanase [Source:UniProtKB/TrEMBL;Acc:A0A287W718]

Coordinates

chrchr7H:+:110878387..110881667

Molecular Weight (calculated)

55198.5 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.368

Length

559 amino acids

Sequence
(BLAST)

001: GGRDVLPGGG GGRRGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XKSLLYFEAQ RSGRLPYGQR VAWRDHSGLT
101: DGLEQGVDLV GGYYDAGDHV KFGLPMAFTV TMLSWSLLEY GGDVAXXXEL AHALESIKWG TDYFIKAHTK PDELWAEVGD GDTDHYCWQR PEDMTTSRQA
201: YKVDRERPGS DVAGETAAAL AAASMAFRET NPHYAHLLLH HAQQLFEFAD KYRGKYDSSI AEVKSYYASV SGYHDELLWA ALWLHRATGR ASYLDYVVDN
301: AHEFGGTGWA ITEFSWDVKY AGVQILATRL LLRGEHEERH RATLQGYRAK AEHYLCACMG KNAAAEDNVE RSPGGMLYVR QWNNMQYVTS AAFLLSVYSG
401: YLTEAGEGAA ATCGEVAVDA GEVFAHARAQ VDYVLGSNPR GISYLVGYGA KFPARVHHRA ASIVPYKDRK EFIGCAQGFD DWFGRKSANP NVVVGAIVGG
501: PDRHDRFRDD RVNYMQTEAC TYNTAPMVGM FAMLNRVARQ QDPTPATTRP EGTTSTAAE

Best Arabidopsis Sequence Match ( AT1G64390.1 )
(BLAST)

001: MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY
101: GNQLQANGEL GNSIDAIKWG TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM AAASIVFRRS NPVYSRLLLT
201: HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA
301: PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV
401: GYGNNFPQRV HHRGSSIVSV KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP LLGVLARLSS GHSGYSQFLP
501: VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE
601: FVYIHSTTPA NVAVSSYTLA

Arabidopsis Description

AtGH9C2Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.